Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AL122020.1-201ENST00000472287 459 ntBASIC5.97□□□□□ -1.45
LIG3P49916 RPS29P25-201ENST00000481709 171 ntBASIC5.97□□□□□ -1.45
LIG3P49916 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC018710.1-201ENST00000506509 158 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.97□□□□□ -1.45
LIG3P49916 PCNAP4-201ENST00000532690 730 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
LIG3P49916 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC068993.1-201ENST00000546724 589 ntBASIC5.97□□□□□ -1.45
LIG3P49916 CBX3P5-201ENST00000552017 521 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 AC107954.1-201ENST00000565906 727 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC092121.1-201ENST00000569452 202 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AP005119.2-201ENST00000579735 1105 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 AL391646.1-201ENST00000603860 190 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC011468.4-201ENST00000603942 409 ntBASIC5.97□□□□□ -1.45
LIG3P49916 COX6CP4-201ENST00000605798 228 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC087045.1-201ENST00000605856 382 ntBASIC5.97□□□□□ -1.45
LIG3P49916 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 AC010133.1-201ENST00000615809 842 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC007742.2-201ENST00000618226 398 ntBASIC5.97□□□□□ -1.45
LIG3P49916 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
LIG3P49916 AC006065.6-201ENST00000625201 545 ntBASIC5.97□□□□□ -1.45
LIG3P49916 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.97□□□□□ -1.45
LIG3P49916 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.97□□□□□ -1.45
LIG3P49916 AC097063.1-201ENST00000426714 1797 ntBASIC5.97□□□□□ -1.45
LIG3P49916 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 AL606537.1-201ENST00000607258 2011 ntBASIC5.97□□□□□ -1.45
LIG3P49916 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 AC091305.2-201ENST00000624049 1576 ntBASIC5.97□□□□□ -1.45
LIG3P49916 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
LIG3P49916 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LIG3P49916 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LIG3P49916 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
LIG3P49916 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
LIG3P49916 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LIG3P49916 MTND4P23-201ENST00000447723 1363 ntBASIC5.96□□□□□ -1.45
LIG3P49916 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 AC009313.2-201ENST00000417893 1941 ntBASIC5.96□□□□□ -1.46
LIG3P49916 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIG3P49916 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIG3P49916 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 RNA5SP510-201ENST00000364697 99 ntBASIC5.96□□□□□ -1.46
LIG3P49916 MRPL42P2-201ENST00000403169 426 ntBASIC5.96□□□□□ -1.46
LIG3P49916 RPL7P25-201ENST00000404151 721 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AL603766.1-201ENST00000407763 664 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AMD1P2-201ENST00000412936 992 ntBASIC5.96□□□□□ -1.46
LIG3P49916 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LIG3P49916 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 BX323845.3-201ENST00000428215 527 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AL389925.1-201ENST00000432257 728 ntBASIC5.96□□□□□ -1.46
LIG3P49916 RPS7P3-201ENST00000443360 580 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 SDC4P-201ENST00000453285 601 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AC114967.1-201ENST00000504890 259 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AC114786.4-201ENST00000508771 728 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 LRRC34P2-201ENST00000514850 553 ntBASIC5.96□□□□□ -1.46
LIG3P49916 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.96□□□□□ -1.46
LIG3P49916 RNU6-1281P-201ENST00000516223 105 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 AF235103.2-201ENST00000525753 346 ntBASIC5.96□□□□□ -1.46
LIG3P49916 AP003181.2-201ENST00000528941 181 ntBASIC5.96□□□□□ -1.46
LIG3P49916 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.96□□□□□ -1.46
LIG3P49916 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.96□□□□□ -1.46
LIG3P49916 H3F3BP2-201ENST00000583907 357 ntBASIC5.96□□□□□ -1.46
LIG3P49916 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.96□□□□□ -1.46
LIG3P49916 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.96□□□□□ -1.46
LIG3P49916 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.96□□□□□ -1.46
LIG3P49916 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms