Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.31□□□□□ -1.72
LHX1P48742 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
LHX1P48742 MRPL35P4-201ENST00000453682 566 ntBASIC4.31□□□□□ -1.72
LHX1P48742 BX248409.1-201ENST00000455497 255 ntBASIC4.31□□□□□ -1.72
LHX1P48742 RNU7-140P-201ENST00000459546 60 ntBASIC4.31□□□□□ -1.72
LHX1P48742 FTH1P21-201ENST00000512179 511 ntBASIC4.31□□□□□ -1.72
LHX1P48742 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 IFITM8P-201ENST00000522529 394 ntBASIC4.31□□□□□ -1.72
LHX1P48742 MTND1P6-201ENST00000523621 946 ntBASIC4.31□□□□□ -1.72
LHX1P48742 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 AC118942.1-201ENST00000529674 1035 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.31□□□□□ -1.72
LHX1P48742 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.31□□□□□ -1.72
LHX1P48742 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.31□□□□□ -1.72
LHX1P48742 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 AC022916.3-201ENST00000592961 742 ntBASIC4.31□□□□□ -1.72
LHX1P48742 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 AC009948.4-201ENST00000604692 675 ntBASIC4.31□□□□□ -1.72
LHX1P48742 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.31□□□□□ -1.72
LHX1P48742 AC093673.2-201ENST00000609674 331 ntBASIC4.31□□□□□ -1.72
LHX1P48742 MIR6868-201ENST00000611215 58 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AC131238.1-201ENST00000617135 328 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AL121594.5-201ENST00000631724 573 ntBASIC4.31□□□□□ -1.72
LHX1P48742 AC099654.9-201ENST00000637055 678 ntBASIC4.31□□□□□ -1.72
LHX1P48742 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LHX1P48742 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.31□□□□□ -1.72
LHX1P48742 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LHX1P48742 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 ASNSP1-204ENST00000641977 1664 ntBASIC4.3□□□□□ -1.72
LHX1P48742 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
LHX1P48742 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.3□□□□□ -1.72
LHX1P48742 RNU4-6P-201ENST00000410804 122 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
LHX1P48742 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 AL031736.2-201ENST00000426573 787 ntBASIC4.3□□□□□ -1.72
LHX1P48742 RPL7P4-203ENST00000430239 730 ntBASIC4.3□□□□□ -1.72
LHX1P48742 ELOCP11-201ENST00000436690 332 ntBASIC4.3□□□□□ -1.72
LHX1P48742 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 ELOCP16-201ENST00000444494 332 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC073522.1-201ENST00000483312 377 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC023050.1-201ENST00000498198 304 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC010460.1-201ENST00000507087 466 ntBASIC4.3□□□□□ -1.72
LHX1P48742 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 AC008494.2-201ENST00000514544 370 ntBASIC4.3□□□□□ -1.72
LHX1P48742 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 ZNF971P-201ENST00000562068 1249 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.3□□□□□ -1.72
LHX1P48742 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.3□□□□□ -1.72
LHX1P48742 AC053481.4-201ENST00000583164 216 ntBASIC4.3□□□□□ -1.72
LHX1P48742 AC104662.1-201ENST00000604448 511 ntBASIC4.3□□□□□ -1.72
LHX1P48742 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LHX1P48742 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
LHX1P48742 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.29□□□□□ -1.72
LHX1P48742 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LHX1P48742 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 OR10J6P-201ENST00000289731 930 ntBASIC4.29□□□□□ -1.72
LHX1P48742 RNU6-353P-201ENST00000364266 108 ntBASIC4.29□□□□□ -1.72
LHX1P48742 SNORA51.12-201ENST00000384448 134 ntBASIC4.29□□□□□ -1.72
LHX1P48742 SNORA37-201ENST00000384504 129 ntBASIC4.29□□□□□ -1.72
LHX1P48742 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.29□□□□□ -1.72
LHX1P48742 RPL21P110-201ENST00000433345 446 ntBASIC4.29□□□□□ -1.72
LHX1P48742 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.29□□□□□ -1.72
LHX1P48742 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.29□□□□□ -1.72
LHX1P48742 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.29□□□□□ -1.72
LHX1P48742 MTND6P18-201ENST00000439477 513 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 FABP3P2-201ENST00000453169 399 ntBASIC4.29□□□□□ -1.72
LHX1P48742 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.29□□□□□ -1.72
LHX1P48742 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.29□□□□□ -1.72
LHX1P48742 AC010683.1-201ENST00000473673 378 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AC091959.2-201ENST00000477363 321 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AC119751.1-201ENST00000513357 765 ntBASIC4.29□□□□□ -1.72
LHX1P48742 IGJP1-201ENST00000522682 475 ntBASIC4.29□□□□□ -1.72
LHX1P48742 OR5M7P-201ENST00000526140 972 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 AL442163.2-201ENST00000553912 710 ntBASIC4.29□□□□□ -1.72
LHX1P48742 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 AC079171.1-201ENST00000568788 914 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 MTCO1P40-201ENST00000574371 625 ntBASIC4.29□□□□□ -1.72
LHX1P48742 MIR4716-201ENST00000579628 84 ntBASIC4.29□□□□□ -1.72
LHX1P48742 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.29□□□□□ -1.72
LHX1P48742 AC093227.2-201ENST00000589357 285 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms