Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.53□□□□□ -1.85
HTTP42858 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.53□□□□□ -1.85
HTTP42858 RPL23AP82-202ENST00000427528 469 ntBASIC3.53□□□□□ -1.85
HTTP42858 CBX1P4-201ENST00000439415 457 ntBASIC3.53□□□□□ -1.85
HTTP42858 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.85
HTTP42858 AL513328.1-201ENST00000446460 224 ntBASIC3.53□□□□□ -1.85
HTTP42858 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HTTP42858 CENPBD1P1-201ENST00000464061 469 ntBASIC3.53□□□□□ -1.85
HTTP42858 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.53□□□□□ -1.85
HTTP42858 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.53□□□□□ -1.85
HTTP42858 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.85
HTTP42858 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.52□□□□□ -1.85
HTTP42858 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 AL672167.1-206ENST00000356293 943 ntBASIC3.52□□□□□ -1.85
HTTP42858 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.52□□□□□ -1.85
HTTP42858 MIR887-201ENST00000401258 79 ntBASIC3.52□□□□□ -1.85
HTTP42858 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.52□□□□□ -1.85
HTTP42858 AP002812.4-201ENST00000532139 286 ntBASIC3.52□□□□□ -1.85
HTTP42858 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.52□□□□□ -1.85
HTTP42858 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.52□□□□□ -1.85
HTTP42858 AL079305.1-201ENST00000623159 3008 ntBASIC3.52□□□□□ -1.85
HTTP42858 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HTTP42858 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HTTP42858 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 RPS17P11-201ENST00000474297 293 ntBASIC3.52□□□□□ -1.85
HTTP42858 FCF1P3-201ENST00000496394 590 ntBASIC3.52□□□□□ -1.85
HTTP42858 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 AL359535.1-201ENST00000612100 1087 ntBASIC3.52□□□□□ -1.85
HTTP42858 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
HTTP42858 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HTTP42858 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HTTP42858 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.51□□□□□ -1.85
HTTP42858 snoU13.15-201ENST00000459407 104 ntBASIC3.51□□□□□ -1.85
HTTP42858 snoU13.26-201ENST00000459452 105 ntBASIC3.51□□□□□ -1.85
HTTP42858 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.51□□□□□ -1.85
HTTP42858 AC018552.3-201ENST00000567416 561 ntBASIC3.51□□□□□ -1.85
HTTP42858 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.51□□□□□ -1.85
HTTP42858 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.51□□□□□ -1.85
HTTP42858 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HTTP42858 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
HTTP42858 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HTTP42858 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HTTP42858 AC074367.1-201ENST00000438685 1125 ntBASIC3.51□□□□□ -1.85
HTTP42858 HMGB3P22-202ENST00000451823 572 ntBASIC3.51□□□□□ -1.85
HTTP42858 HSPE1P6-201ENST00000479457 291 ntBASIC3.51□□□□□ -1.85
HTTP42858 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.51□□□□□ -1.85
HTTP42858 AC009159.1-201ENST00000618386 642 ntBASIC3.51□□□□□ -1.85
HTTP42858 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC3.51□□□□□ -1.85
HTTP42858 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.51□□□□□ -1.85
HTTP42858 AC099063.2-201ENST00000446360 662 ntBASIC3.5□□□□□ -1.85
HTTP42858 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.5□□□□□ -1.85
HTTP42858 AC023389.2-201ENST00000580031 955 ntBASIC3.5□□□□□ -1.85
HTTP42858 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 Z95331.1-201ENST00000623075 23112 ntBASIC3.5□□□□□ -1.85
HTTP42858 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HTTP42858 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HTTP42858 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HTTP42858 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 SMC4P1-201ENST00000414479 527 ntBASIC3.5□□□□□ -1.85
HTTP42858 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.5□□□□□ -1.85
HTTP42858 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 ANXA2P1-201ENST00000505539 926 ntBASIC3.5□□□□□ -1.85
HTTP42858 AC034159.1-201ENST00000513885 583 ntBASIC3.5□□□□□ -1.85
HTTP42858 RN7SKP31-201ENST00000516354 278 ntBASIC3.5□□□□□ -1.85
HTTP42858 AC009852.2-201ENST00000567898 485 ntBASIC3.5□□□□□ -1.85
HTTP42858 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.5□□□□□ -1.85
HTTP42858 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.5□□□□□ -1.85
HTTP42858 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.5□□□□□ -1.85
HTTP42858 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.5□□□□□ -1.85
HTTP42858 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HTTP42858 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HTTP42858 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HTTP42858 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.5□□□□□ -1.85
HTTP42858 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 AC139713.2-215ENST00000641428 5037 ntBASIC3.5□□□□□ -1.85
HTTP42858 AC063976.3-201ENST00000426849 329 ntBASIC3.5□□□□□ -1.85
HTTP42858 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.5□□□□□ -1.85
HTTP42858 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HTTP42858 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HTTP42858 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HTTP42858 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HTTP42858 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HTTP42858 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HTTP42858 AL079342.1-201ENST00000401460 267 ntBASIC3.49□□□□□ -1.85
HTTP42858 RNA5SP184-201ENST00000411071 108 ntBASIC3.49□□□□□ -1.85
HTTP42858 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms