Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 DUXAP8-207ENST00000456786 622 ntBASIC4.52□□□□□ -1.69
HADHAP40939 RPL21P103-201ENST00000479921 488 ntBASIC4.52□□□□□ -1.69
HADHAP40939 BOLA3P3-201ENST00000505182 232 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.52□□□□□ -1.69
HADHAP40939 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.52□□□□□ -1.69
HADHAP40939 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.52□□□□□ -1.69
HADHAP40939 MTND2P26-201ENST00000528255 1029 ntBASIC4.52□□□□□ -1.69
HADHAP40939 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
HADHAP40939 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.52□□□□□ -1.69
HADHAP40939 MIR4284-201ENST00000578924 81 ntBASIC4.52□□□□□ -1.69
HADHAP40939 RN7SL339P-201ENST00000580597 296 ntBASIC4.52□□□□□ -1.69
HADHAP40939 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HADHAP40939 MIR5096-201ENST00000583713 70 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
HADHAP40939 AC103792.1-201ENST00000603591 919 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AC008745.1-201ENST00000604064 271 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AC010201.1-201ENST00000605051 540 ntBASIC4.52□□□□□ -1.69
HADHAP40939 DUXAP10-204ENST00000612052 616 ntBASIC4.52□□□□□ -1.69
HADHAP40939 AL138721.1-201ENST00000616756 179 ntBASIC4.52□□□□□ -1.69
HADHAP40939 MIR4496-201ENST00000635896 61 ntBASIC4.52□□□□□ -1.69
HADHAP40939 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.52□□□□□ -1.69
HADHAP40939 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HADHAP40939 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HADHAP40939 AC139769.1-204ENST00000472297 1931 ntBASIC4.52□□□□□ -1.69
HADHAP40939 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
HADHAP40939 AL122126.1-201ENST00000546905 1318 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AL355578.1-201ENST00000607405 1328 ntBASIC4.51□□□□□ -1.69
HADHAP40939 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HADHAP40939 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 MIR124-3-201ENST00000384866 87 ntBASIC4.51□□□□□ -1.69
HADHAP40939 LAP3P1-201ENST00000403648 294 ntBASIC4.51□□□□□ -1.69
HADHAP40939 RNA5SP239-201ENST00000410218 129 ntBASIC4.51□□□□□ -1.69
HADHAP40939 SNORA74C-2-201ENST00000411179 201 ntBASIC4.51□□□□□ -1.69
HADHAP40939 MTCO2P8-201ENST00000412213 658 ntBASIC4.51□□□□□ -1.69
HADHAP40939 RPS15AP40-201ENST00000419621 391 ntBASIC4.51□□□□□ -1.69
HADHAP40939 UQCRBP1-201ENST00000421129 336 ntBASIC4.51□□□□□ -1.69
HADHAP40939 OR2X1P-201ENST00000421144 687 ntBASIC4.51□□□□□ -1.69
HADHAP40939 C1DP1-201ENST00000426049 402 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 AL645638.1-201ENST00000440519 361 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 DDX39BP2-208ENST00000453923 258 ntBASIC4.51□□□□□ -1.69
HADHAP40939 NF1P3-201ENST00000457709 450 ntBASIC4.51□□□□□ -1.69
HADHAP40939 snoU13.1-201ENST00000459157 104 ntBASIC4.51□□□□□ -1.69
HADHAP40939 SNORD108-201ENST00000459332 71 ntBASIC4.51□□□□□ -1.69
HADHAP40939 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 AC087879.1-201ENST00000474343 374 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 AC012170.1-201ENST00000495139 359 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.51□□□□□ -1.69
HADHAP40939 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 PPBPP1-201ENST00000510807 373 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.51□□□□□ -1.69
HADHAP40939 AP000827.1-201ENST00000527814 258 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 AP001781.1-201ENST00000530977 207 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.51□□□□□ -1.69
HADHAP40939 CENPUP2-201ENST00000555897 1186 ntBASIC4.51□□□□□ -1.69
HADHAP40939 MTCYBP23-201ENST00000558717 1102 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 MTND1P8-201ENST00000571424 950 ntBASIC4.51□□□□□ -1.69
HADHAP40939 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.51□□□□□ -1.69
HADHAP40939 MIR5708-201ENST00000579723 85 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.51□□□□□ -1.69
HADHAP40939 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 AL138478.1-201ENST00000612252 832 ntBASIC4.51□□□□□ -1.69
HADHAP40939 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 MIR7703-201ENST00000620784 77 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC004943.3-201ENST00000624116 600 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AC090506.2-201ENST00000624521 419 ntBASIC4.51□□□□□ -1.69
HADHAP40939 AL049536.1-201ENST00000625043 744 ntBASIC4.51□□□□□ -1.69
HADHAP40939 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.51□□□□□ -1.69
HADHAP40939 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HADHAP40939 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HADHAP40939 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HADHAP40939 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.5□□□□□ -1.69
HADHAP40939 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HADHAP40939 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.5□□□□□ -1.69
HADHAP40939 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.5□□□□□ -1.69
HADHAP40939 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HADHAP40939 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HADHAP40939 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HADHAP40939 BTBD10P2-201ENST00000404779 676 ntBASIC4.5□□□□□ -1.69
HADHAP40939 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HADHAP40939 AL160275.2-201ENST00000412010 394 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms