Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGCLP35914 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGCLP35914 METTL21EP-201ENST00000298105 713 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 RNU6-666P-201ENST00000363499 107 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 U3.15-201ENST00000365398 212 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 RNU6-213P-201ENST00000384051 104 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 MIR199A2-201ENST00000385289 110 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 Z97055.1-201ENST00000419730 712 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 AL035458.1-201ENST00000433096 585 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 ATP5HP2-201ENST00000433885 485 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 MTCYBP21-201ENST00000443300 1113 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 AC044797.1-201ENST00000445744 679 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 RPS4XP15-201ENST00000489210 795 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGCLP35914 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC006518.1-201ENST00000541449 943 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 MIR3160-1-201ENST00000577972 85 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC006116.7-201ENST00000590141 756 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC079610.2-201ENST00000604818 690 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC112503.2-201ENST00000609005 552 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 AC068831.8-201ENST00000620171 435 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCLP35914 AC083865.1-201ENST00000636634 831 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 LINC02471-203ENST00000641941 4752 ntBASIC3.91□□□□□ -1.78
HMGCLP35914 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCLP35914 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCLP35914 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
HMGCLP35914 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCLP35914 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCLP35914 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCLP35914 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCLP35914 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCLP35914 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCLP35914 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGCLP35914 RNA5SP322-201ENST00000363617 119 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 SNORD56.4-201ENST00000363883 71 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCLP35914 RNU6-244P-201ENST00000391028 104 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 RNU6-628P-201ENST00000410675 107 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 BX664727.1-201ENST00000416024 466 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 RANP8-201ENST00000444720 713 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 RPL34P26-201ENST00000445636 354 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 EXTL2P1-201ENST00000446218 416 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC008379.1-201ENST00000463655 464 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 AC068587.1-201ENST00000483613 781 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCLP35914 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 IGKV2D-23-201ENST00000518179 286 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGCLP35914 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCLP35914 AP000916.1-201ENST00000533869 835 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 AC009101.1-201ENST00000568135 242 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 MIR4286-201ENST00000580651 93 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC053481.4-201ENST00000583164 216 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC067959.1-201ENST00000604334 379 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC010857.1-201ENST00000606398 594 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC021851.1-201ENST00000608537 1082 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC110792.4-201ENST00000609843 298 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCLP35914 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCLP35914 AL138955.1-201ENST00000622881 1040 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 C2orf27A-204ENST00000623058 969 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 AC145207.9-201ENST00000623802 325 ntBASIC3.9□□□□□ -1.79
HMGCLP35914 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCLP35914 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms