Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.78□□□□□ -1.8
RORAP35398 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
RORAP35398 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.78□□□□□ -1.8
RORAP35398 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
RORAP35398 AC022968.1-201ENST00000567372 442 ntBASIC3.78□□□□□ -1.8
RORAP35398 MIR4429-201ENST00000580105 73 ntBASIC3.78□□□□□ -1.8
RORAP35398 AC107982.3-201ENST00000584957 985 ntBASIC3.78□□□□□ -1.8
RORAP35398 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.78□□□□□ -1.8
RORAP35398 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RORAP35398 OR8B1P-202ENST00000641132 1178 ntBASIC3.78□□□□□ -1.8
RORAP35398 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RORAP35398 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RORAP35398 DDX6P1-205ENST00000441966 1436 ntBASIC3.78□□□□□ -1.8
RORAP35398 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.77□□□□□ -1.81
RORAP35398 AL161912.2-201ENST00000565707 3007 ntBASIC3.77□□□□□ -1.81
RORAP35398 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.77□□□□□ -1.81
RORAP35398 ZNF33CP-201ENST00000432492 2030 ntBASIC3.77□□□□□ -1.81
RORAP35398 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 ATP5F1P3-201ENST00000397213 657 ntBASIC3.77□□□□□ -1.81
RORAP35398 CCNB2P1-201ENST00000399411 1150 ntBASIC3.77□□□□□ -1.81
RORAP35398 MIR1251-201ENST00000408552 70 ntBASIC3.77□□□□□ -1.81
RORAP35398 RNU6ATAC-201ENST00000408749 126 ntBASIC3.77□□□□□ -1.81
RORAP35398 AC010385.1-201ENST00000412374 256 ntBASIC3.77□□□□□ -1.81
RORAP35398 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 AL445584.1-201ENST00000431451 330 ntBASIC3.77□□□□□ -1.81
RORAP35398 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.77□□□□□ -1.81
RORAP35398 MTND2P21-201ENST00000436242 1042 ntBASIC3.77□□□□□ -1.81
RORAP35398 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 MTND2P3-201ENST00000452458 470 ntBASIC3.77□□□□□ -1.81
RORAP35398 OR9M1P-201ENST00000459641 921 ntBASIC3.77□□□□□ -1.81
RORAP35398 AC007688.1-201ENST00000475592 759 ntBASIC3.77□□□□□ -1.81
RORAP35398 GAPDHP36-201ENST00000480688 918 ntBASIC3.77□□□□□ -1.81
RORAP35398 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.77□□□□□ -1.81
RORAP35398 MTCO1P31-201ENST00000506355 492 ntBASIC3.77□□□□□ -1.81
RORAP35398 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 NDUFA5P2-201ENST00000519723 344 ntBASIC3.77□□□□□ -1.81
RORAP35398 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.77□□□□□ -1.81
RORAP35398 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.77□□□□□ -1.81
RORAP35398 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.77□□□□□ -1.81
RORAP35398 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.77□□□□□ -1.81
RORAP35398 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.77□□□□□ -1.81
RORAP35398 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.77□□□□□ -1.81
RORAP35398 AC079171.1-201ENST00000568788 914 ntBASIC3.77□□□□□ -1.81
RORAP35398 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.77□□□□□ -1.81
RORAP35398 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.77□□□□□ -1.81
RORAP35398 KATNBL1P1-201ENST00000605192 748 ntBASIC3.77□□□□□ -1.81
RORAP35398 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.77□□□□□ -1.81
RORAP35398 AC039056.2-201ENST00000622261 511 ntBASIC3.77□□□□□ -1.81
RORAP35398 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.77□□□□□ -1.81
RORAP35398 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RORAP35398 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 AC006042.3-201ENST00000454684 1469 ntBASIC3.77□□□□□ -1.81
RORAP35398 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RORAP35398 MAPK10-253ENST00000641010 4072 ntBASIC3.77□□□□□ -1.81
RORAP35398 HSPA8P1-201ENST00000425843 1833 ntBASIC3.77□□□□□ -1.81
RORAP35398 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RORAP35398 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RORAP35398 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RORAP35398 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RORAP35398 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
RORAP35398 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 RNA5SP306-201ENST00000411087 107 ntBASIC3.76□□□□□ -1.81
RORAP35398 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 AL389915.1-201ENST00000422463 466 ntBASIC3.76□□□□□ -1.81
RORAP35398 AC008065.1-201ENST00000428525 348 ntBASIC3.76□□□□□ -1.81
RORAP35398 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
RORAP35398 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 AL139099.1-201ENST00000497398 403 ntBASIC3.76□□□□□ -1.81
RORAP35398 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 USP9YP5-201ENST00000511770 630 ntBASIC3.76□□□□□ -1.81
RORAP35398 MTCO1P30-201ENST00000515244 580 ntBASIC3.76□□□□□ -1.81
RORAP35398 RNA5SP179-201ENST00000517284 121 ntBASIC3.76□□□□□ -1.81
RORAP35398 IGKV2-38-201ENST00000517443 247 ntBASIC3.76□□□□□ -1.81
RORAP35398 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.76□□□□□ -1.81
RORAP35398 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms