Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RPS7P5-201ENST00000441482 581 ntBASIC2.53□□□□□ -2
CKS2P33552 AL353898.1-201ENST00000444055 238 ntBASIC2.53□□□□□ -2
CKS2P33552 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.53□□□□□ -2
CKS2P33552 AC008264.1-201ENST00000447612 367 ntBASIC2.53□□□□□ -2
CKS2P33552 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.53□□□□□ -2
CKS2P33552 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
CKS2P33552 AC078918.1-201ENST00000498515 228 ntBASIC2.53□□□□□ -2
CKS2P33552 FTH1P24-201ENST00000503502 462 ntBASIC2.53□□□□□ -2
CKS2P33552 HMGB3P15-201ENST00000507326 574 ntBASIC2.53□□□□□ -2
CKS2P33552 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.53□□□□□ -2
CKS2P33552 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CKS2P33552 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.53□□□□□ -2
CKS2P33552 UBE2NP1-201ENST00000545592 458 ntBASIC2.53□□□□□ -2
CKS2P33552 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.53□□□□□ -2
CKS2P33552 OR4U1P-201ENST00000554958 912 ntBASIC2.53□□□□□ -2
CKS2P33552 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.53□□□□□ -2
CKS2P33552 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.53□□□□□ -2
CKS2P33552 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.53□□□□□ -2
CKS2P33552 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.53□□□□□ -2
CKS2P33552 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.53□□□□□ -2
CKS2P33552 OR7E18P-201ENST00000592589 702 ntBASIC2.53□□□□□ -2
CKS2P33552 AL591034.3-201ENST00000605511 685 ntBASIC2.53□□□□□ -2
CKS2P33552 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.53□□□□□ -2
CKS2P33552 AL049539.1-201ENST00000611964 459 ntBASIC2.53□□□□□ -2
CKS2P33552 AC243654.2-201ENST00000612843 443 ntBASIC2.53□□□□□ -2
CKS2P33552 PLCE1P1-201ENST00000622094 305 ntBASIC2.53□□□□□ -2
CKS2P33552 AC048347.1-201ENST00000624621 427 ntBASIC2.53□□□□□ -2
CKS2P33552 AC073476.4-201ENST00000628409 72 ntBASIC2.53□□□□□ -2
CKS2P33552 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.53□□□□□ -2
CKS2P33552 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.53□□□□□ -2
CKS2P33552 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CKS2P33552 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.53□□□□□ -2
CKS2P33552 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.53□□□□□ -2
CKS2P33552 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
CKS2P33552 AL356274.2-201ENST00000624379 3752 ntBASIC2.53□□□□□ -2.01
CKS2P33552 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CKS2P33552 SRP72P2-201ENST00000344851 1979 ntBASIC2.52□□□□□ -2.01
CKS2P33552 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 ELL2P4-201ENST00000446870 1376 ntBASIC2.52□□□□□ -2.01
CKS2P33552 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.52□□□□□ -2.01
CKS2P33552 AL133270.1-201ENST00000402635 279 ntBASIC2.52□□□□□ -2.01
CKS2P33552 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.52□□□□□ -2.01
CKS2P33552 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS2P33552 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 AC006960.1-201ENST00000419980 153 ntBASIC2.52□□□□□ -2.01
CKS2P33552 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 HMGB3P11-201ENST00000440127 604 ntBASIC2.52□□□□□ -2.01
CKS2P33552 AC239367.2-201ENST00000447309 705 ntBASIC2.52□□□□□ -2.01
CKS2P33552 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 U3.44-201ENST00000458938 192 ntBASIC2.52□□□□□ -2.01
CKS2P33552 RPL21P103-201ENST00000479921 488 ntBASIC2.52□□□□□ -2.01
CKS2P33552 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 RPS4XP14-201ENST00000493072 781 ntBASIC2.52□□□□□ -2.01
CKS2P33552 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 MTATP6P22-201ENST00000507369 598 ntBASIC2.52□□□□□ -2.01
CKS2P33552 AC005921.1-201ENST00000510589 286 ntBASIC2.52□□□□□ -2.01
CKS2P33552 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 AC010265.1-201ENST00000513509 211 ntBASIC2.52□□□□□ -2.01
CKS2P33552 RNA5SP217-201ENST00000515959 91 ntBASIC2.52□□□□□ -2.01
CKS2P33552 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS2P33552 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 AL845331.3-202ENST00000562856 261 ntBASIC2.52□□□□□ -2.01
CKS2P33552 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.52□□□□□ -2.01
CKS2P33552 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS2P33552 AP003117.1-201ENST00000602771 554 ntBASIC2.52□□□□□ -2.01
CKS2P33552 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 AL365400.2-201ENST00000605604 902 ntBASIC2.52□□□□□ -2.01
CKS2P33552 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.52□□□□□ -2.01
CKS2P33552 AC105429.2-201ENST00000610567 517 ntBASIC2.52□□□□□ -2.01
CKS2P33552 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 AP001784.1-201ENST00000624107 428 ntBASIC2.52□□□□□ -2.01
CKS2P33552 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.52□□□□□ -2.01
CKS2P33552 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKS2P33552 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CKS2P33552 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CKS2P33552 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS2P33552 AC005183.1-201ENST00000603687 1979 ntBASIC2.51□□□□□ -2.01
CKS2P33552 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CKS2P33552 SNORA31-201ENST00000362607 130 ntBASIC2.51□□□□□ -2.01
CKS2P33552 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CKS2P33552 RNU6-398P-201ENST00000384143 109 ntBASIC2.51□□□□□ -2.01
CKS2P33552 SNORA70E-201ENST00000384492 135 ntBASIC2.51□□□□□ -2.01
CKS2P33552 RPL21P65-201ENST00000406094 466 ntBASIC2.51□□□□□ -2.01
CKS2P33552 RNA5SP44-201ENST00000410446 133 ntBASIC2.51□□□□□ -2.01
CKS2P33552 AC013404.1-201ENST00000413068 249 ntBASIC2.51□□□□□ -2.01
CKS2P33552 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.51□□□□□ -2.01
CKS2P33552 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CKS2P33552 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.51□□□□□ -2.01
CKS2P33552 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.51□□□□□ -2.01
CKS2P33552 AL772161.1-201ENST00000439130 476 ntBASIC2.51□□□□□ -2.01
CKS2P33552 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms