Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 MIR2116-201ENST00000517221 80 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 AC104115.2-201ENST00000523026 687 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 MTND2P26-201ENST00000528255 1029 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC13P31276 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXC13P31276 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 AL139022.2-201ENST00000606934 443 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC021851.1-201ENST00000608537 1082 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 U73479.1-201ENST00000618062 168 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 uc_338.13-201ENST00000618243 179 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC007546.1-201ENST00000619452 559 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC13P31276 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC13P31276 AC017104.4-201ENST00000636283 1592 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 LARP1BP1-201ENST00000506036 1359 ntBASIC4.52□□□□□ -1.69
HOXC13P31276 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC13P31276 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC13P31276 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXC13P31276 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXC13P31276 RNA5SP189-201ENST00000364920 115 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 SNORA11F-201ENST00000408237 128 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 OR8G2P-201ENST00000412796 908 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC13P31276 PTP4A1P5-201ENST00000420305 455 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC13P31276 RPL23AP38-201ENST00000423801 469 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC006946.1-201ENST00000429106 328 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC13P31276 AC006994.1-201ENST00000438212 839 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC009263.1-201ENST00000441193 1239 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 AL096803.2-201ENST00000450032 677 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 MRPL35P4-201ENST00000453682 566 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 RPS20P32-201ENST00000456044 356 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC005921.1-201ENST00000510589 286 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 MTCO1P49-201ENST00000523429 802 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 AC011611.5-201ENST00000552477 578 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC13P31276 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 AC006270.2-201ENST00000578523 652 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC113403.1-201ENST00000604910 193 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 BNIP3P19-201ENST00000605397 577 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC063944.3-201ENST00000609969 533 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AP005229.2-201ENST00000609980 697 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.51□□□□□ -1.69
HOXC13P31276 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HOXC13P31276 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC13P31276 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC13P31276 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC13P31276 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HOXC13P31276 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
HOXC13P31276 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC13P31276 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC13P31276 FAM91A3P-201ENST00000456826 2544 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXC13P31276 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 RNU1-85P-201ENST00000364127 164 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 RNA5SP387-201ENST00000364226 106 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC13P31276 GCNT6-201ENST00000379591 934 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 RNU6-1293P-201ENST00000384077 107 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 RNU6-1176P-201ENST00000390955 107 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC13P31276 AC097374.1-203ENST00000400783 485 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AL355379.1-201ENST00000405542 640 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AL445189.1-201ENST00000405722 338 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 SNORA11C-201ENST00000408532 129 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 EI24P1-201ENST00000416584 867 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC241520.1-201ENST00000422654 1099 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC13P31276 DEFB130D-201ENST00000426866 237 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 FABP5P3-201ENST00000437960 408 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms