Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC025574.1-201ENST00000554784 1653 ntBASIC4.9□□□□□ -1.62
CD40P25942 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD40P25942 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD40P25942 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.9□□□□□ -1.62
CD40P25942 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CD40P25942 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CD40P25942 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CD40P25942 RNVU1-3-201ENST00000364313 161 ntBASIC4.9□□□□□ -1.63
CD40P25942 Y_RNA.453-201ENST00000384223 109 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC127391.1-201ENST00000411737 98 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC004987.3-201ENST00000413879 771 ntBASIC4.9□□□□□ -1.63
CD40P25942 MTCYBP24-201ENST00000420387 1106 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 ELOCP14-201ENST00000428070 331 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.9□□□□□ -1.63
CD40P25942 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40P25942 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 AC073410.1-201ENST00000435125 589 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC104850.1-201ENST00000435940 476 ntBASIC4.9□□□□□ -1.63
CD40P25942 ELOCP7-201ENST00000439968 331 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL662791.1-201ENST00000441992 928 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 NFU1P2-201ENST00000448700 469 ntBASIC4.9□□□□□ -1.63
CD40P25942 GAPDHP14-201ENST00000450472 937 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
CD40P25942 BX276092.4-201ENST00000452056 248 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL359385.1-201ENST00000456509 365 ntBASIC4.9□□□□□ -1.63
CD40P25942 AP1S2P1-201ENST00000457344 379 ntBASIC4.9□□□□□ -1.63
CD40P25942 RPS4XP14-201ENST00000493072 781 ntBASIC4.9□□□□□ -1.63
CD40P25942 RN7SL284P-201ENST00000498823 275 ntBASIC4.9□□□□□ -1.63
CD40P25942 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 SNORA81.2-201ENST00000516868 170 ntBASIC4.9□□□□□ -1.63
CD40P25942 RN7SKP277-201ENST00000516895 283 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 OR8Q1P-201ENST00000526467 655 ntBASIC4.9□□□□□ -1.63
CD40P25942 OR5AQ1P-201ENST00000527596 927 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40P25942 AC107918.3-201ENST00000533272 382 ntBASIC4.9□□□□□ -1.63
CD40P25942 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.9□□□□□ -1.63
CD40P25942 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD40P25942 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.9□□□□□ -1.63
CD40P25942 AL845331.3-202ENST00000562856 261 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC107954.1-201ENST00000565906 727 ntBASIC4.9□□□□□ -1.63
CD40P25942 MRPS21P7-201ENST00000566937 238 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC015720.2-201ENST00000567709 334 ntBASIC4.9□□□□□ -1.63
CD40P25942 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40P25942 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 AL513327.3-201ENST00000602618 469 ntBASIC4.9□□□□□ -1.63
CD40P25942 AP000907.4-201ENST00000604143 237 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL139286.1-201ENST00000604465 483 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC121334.2-201ENST00000605387 271 ntBASIC4.9□□□□□ -1.63
CD40P25942 MIR98-201ENST00000606724 119 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL357078.3-201ENST00000607528 618 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC079395.2-201ENST00000610982 737 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL133173.2-201ENST00000614270 90 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC091905.1-201ENST00000624400 311 ntBASIC4.9□□□□□ -1.63
CD40P25942 AP003400.3-201ENST00000624904 346 ntBASIC4.9□□□□□ -1.63
CD40P25942 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.9□□□□□ -1.63
CD40P25942 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD40P25942 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CD40P25942 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CD40P25942 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.9□□□□□ -1.63
CD40P25942 Z95327.2-201ENST00000414579 1873 ntBASIC4.9□□□□□ -1.63
CD40P25942 AC007159.1-201ENST00000566529 4706 ntBASIC4.89□□□□□ -1.63
CD40P25942 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 NUP58P1-201ENST00000502546 1738 ntBASIC4.89□□□□□ -1.63
CD40P25942 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 AP000547.3-204ENST00000588548 2523 ntBASIC4.89□□□□□ -1.63
CD40P25942 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CD40P25942 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
CD40P25942 FRG1BP-201ENST00000278882 761 ntBASIC4.89□□□□□ -1.63
CD40P25942 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40P25942 Y_RNA.1-201ENST00000352915 104 ntBASIC4.89□□□□□ -1.63
CD40P25942 RNU6-97P-201ENST00000363387 104 ntBASIC4.89□□□□□ -1.63
CD40P25942 RNU1-59P-201ENST00000364829 162 ntBASIC4.89□□□□□ -1.63
CD40P25942 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CD40P25942 Y_RNA.409-201ENST00000383990 98 ntBASIC4.89□□□□□ -1.63
CD40P25942 RPL11P3-201ENST00000395256 523 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL391361.1-201ENST00000405580 489 ntBASIC4.89□□□□□ -1.63
CD40P25942 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.89□□□□□ -1.63
CD40P25942 RNU2-8P-201ENST00000410727 190 ntBASIC4.89□□□□□ -1.63
CD40P25942 RPL31P2-201ENST00000413849 377 ntBASIC4.89□□□□□ -1.63
CD40P25942 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms