Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC006028.1-201ENST00000438379 402 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.15□□□□□ -1.75
COL5A3P25940 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.15□□□□□ -1.75
COL5A3P25940 RPS3AP43-201ENST00000479743 781 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 AC068724.1-201ENST00000487100 792 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 RPL5P23-201ENST00000496040 868 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.15□□□□□ -1.75
COL5A3P25940 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.15□□□□□ -1.75
COL5A3P25940 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.15□□□□□ -1.75
COL5A3P25940 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.15□□□□□ -1.75
COL5A3P25940 AL596275.2-204ENST00000641628 552 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 AL596275.2-206ENST00000641957 626 ntBASIC4.15□□□□□ -1.75
COL5A3P25940 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 AC139713.2-215ENST00000641428 5037 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 RNA5SP235-201ENST00000365411 114 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 YWHAEP5-201ENST00000431545 765 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 AC073587.1-201ENST00000447093 876 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 NPM1P29-201ENST00000483112 803 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 AC010374.2-201ENST00000512933 535 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.14□□□□□ -1.75
COL5A3P25940 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.14□□□□□ -1.75
COL5A3P25940 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.14□□□□□ -1.75
COL5A3P25940 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 BRDTP1-201ENST00000605735 677 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL5A3P25940 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 AL356489.2-201ENST00000566968 3528 ntBASIC4.14□□□□□ -1.75
COL5A3P25940 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL5A3P25940 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.14□□□□□ -1.75
COL5A3P25940 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL5A3P25940 AC073325.2-201ENST00000339545 159 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 MIR422A-201ENST00000362286 90 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 RNU6-283P-201ENST00000364788 107 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 AL138885.1-201ENST00000405921 675 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 RPL12P46-201ENST00000436610 195 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.13□□□□□ -1.75
COL5A3P25940 AL357552.1-201ENST00000445254 415 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.13□□□□□ -1.75
COL5A3P25940 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.13□□□□□ -1.75
COL5A3P25940 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.13□□□□□ -1.75
COL5A3P25940 AC006946.3-201ENST00000609791 756 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 uc_338.25-201ENST00000613756 156 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 AL162574.2-201ENST00000614618 657 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 AC233309.1-201ENST00000619522 751 ntBASIC4.13□□□□□ -1.75
COL5A3P25940 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL5A3P25940 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL5A3P25940 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
COL5A3P25940 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.13□□□□□ -1.75
COL5A3P25940 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL5A3P25940 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL5A3P25940 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.12□□□□□ -1.75
COL5A3P25940 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.12□□□□□ -1.75
COL5A3P25940 RPL35AP12-201ENST00000425362 338 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AC105272.1-201ENST00000438604 198 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 RN7SL429P-201ENST00000479090 223 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
COL5A3P25940 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.12□□□□□ -1.75
COL5A3P25940 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.12□□□□□ -1.75
COL5A3P25940 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.12□□□□□ -1.75
COL5A3P25940 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 BNIP3P38-201ENST00000601117 544 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AL162713.1-201ENST00000604480 262 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.12□□□□□ -1.75
COL5A3P25940 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
COL5A3P25940 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL5A3P25940 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL5A3P25940 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL5A3P25940 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL5A3P25940 SNORD67-201ENST00000390833 111 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AC012065.2-201ENST00000421295 375 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 OR6K4P-201ENST00000423179 955 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AC010469.1-201ENST00000463864 576 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 RPS27AP1-201ENST00000475545 471 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.12□□□□□ -1.75
COL5A3P25940 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.12□□□□□ -1.75
COL5A3P25940 UBL5P2-201ENST00000583788 219 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 MIR7106-201ENST00000612419 65 ntBASIC4.12□□□□□ -1.75
COL5A3P25940 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL5A3P25940 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL5A3P25940 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.11□□□□□ -1.75
COL5A3P25940 AC017071.1-201ENST00000564407 2204 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms