Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.31□□□□□ -1.4
LIG1P18858 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
LIG1P18858 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.31□□□□□ -1.4
LIG1P18858 LINC00561-201ENST00000565815 2738 ntBASIC6.31□□□□□ -1.4
LIG1P18858 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.31□□□□□ -1.4
LIG1P18858 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIG1P18858 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
LIG1P18858 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.3□□□□□ -1.4
LIG1P18858 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 AC107027.3-201ENST00000565095 3473 ntBASIC6.3□□□□□ -1.4
LIG1P18858 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.3□□□□□ -1.4
LIG1P18858 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.3□□□□□ -1.4
LIG1P18858 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 MIR323A-201ENST00000362199 86 ntBASIC6.3□□□□□ -1.4
LIG1P18858 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 RNU6-692P-201ENST00000384496 107 ntBASIC6.3□□□□□ -1.4
LIG1P18858 SNORD116-23-201ENST00000384645 92 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AL009179.1-201ENST00000406085 265 ntBASIC6.3□□□□□ -1.4
LIG1P18858 RNU2-50P-201ENST00000410494 143 ntBASIC6.3□□□□□ -1.4
LIG1P18858 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 RPL34P3-201ENST00000421454 338 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 BX890604.2-201ENST00000427883 474 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.3□□□□□ -1.4
LIG1P18858 AL451074.3-201ENST00000437709 472 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 RPL26P28-201ENST00000451325 435 ntBASIC6.3□□□□□ -1.4
LIG1P18858 BX322784.1-201ENST00000455793 1077 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC092757.1-201ENST00000467293 467 ntBASIC6.3□□□□□ -1.4
LIG1P18858 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.3□□□□□ -1.4
LIG1P18858 AL035404.1-201ENST00000497982 568 ntBASIC6.3□□□□□ -1.4
LIG1P18858 IGBP1P4-201ENST00000503202 879 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 MTCO3P9-201ENST00000506989 781 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 AC026412.2-201ENST00000512270 1075 ntBASIC6.3□□□□□ -1.4
LIG1P18858 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 RNU6-615P-201ENST00000516065 106 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 AF235103.2-201ENST00000525753 346 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 RN7SL290P-201ENST00000578661 300 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.3□□□□□ -1.4
LIG1P18858 AP000769.2-201ENST00000602344 396 ntBASIC6.3□□□□□ -1.4
LIG1P18858 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 BNIP3P11-201ENST00000603878 563 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC091488.1-201ENST00000604239 660 ntBASIC6.3□□□□□ -1.4
LIG1P18858 AC112191.3-201ENST00000604371 277 ntBASIC6.3□□□□□ -1.4
LIG1P18858 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.3□□□□□ -1.4
LIG1P18858 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 AC092376.2-201ENST00000622621 4116 ntBASIC6.3□□□□□ -1.4
LIG1P18858 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIG1P18858 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.3□□□□□ -1.4
LIG1P18858 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.3□□□□□ -1.4
LIG1P18858 AL450326.2-201ENST00000421913 1962 ntBASIC6.29□□□□□ -1.4
LIG1P18858 GDI2P1-201ENST00000429312 1336 ntBASIC6.29□□□□□ -1.4
LIG1P18858 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.29□□□□□ -1.4
LIG1P18858 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 AC007996.1-201ENST00000620414 2821 ntBASIC6.29□□□□□ -1.4
LIG1P18858 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 RNU6-178P-201ENST00000384631 104 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AL034374.1-201ENST00000406329 351 ntBASIC6.29□□□□□ -1.4
LIG1P18858 RNU4-55P-201ENST00000410731 137 ntBASIC6.29□□□□□ -1.4
LIG1P18858 BOLA3P4-201ENST00000418151 400 ntBASIC6.29□□□□□ -1.4
LIG1P18858 USP9YP27-201ENST00000418455 438 ntBASIC6.29□□□□□ -1.4
LIG1P18858 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.29□□□□□ -1.4
LIG1P18858 AC093155.2-201ENST00000420734 937 ntBASIC6.29□□□□□ -1.4
LIG1P18858 FABP7P1-201ENST00000424004 391 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC073335.1-201ENST00000427776 363 ntBASIC6.29□□□□□ -1.4
LIG1P18858 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.29□□□□□ -1.4
LIG1P18858 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.29□□□□□ -1.4
LIG1P18858 AC006335.2-201ENST00000437993 330 ntBASIC6.29□□□□□ -1.4
LIG1P18858 UBE2V1P5-201ENST00000440070 405 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AP000281.1-201ENST00000444036 316 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms