Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SHQ1P1-201ENST00000437111 1544 ntBASIC5.31□□□□□ -1.56
ATF4P18848 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATF4P18848 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATF4P18848 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.31□□□□□ -1.56
ATF4P18848 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.31□□□□□ -1.56
ATF4P18848 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATF4P18848 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC002525.1-201ENST00000624392 1622 ntBASIC5.3□□□□□ -1.56
ATF4P18848 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 AC083843.2-201ENST00000568248 6253 ntBASIC5.3□□□□□ -1.56
ATF4P18848 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
ATF4P18848 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ATF4P18848 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 SNORA69-201ENST00000383895 132 ntBASIC5.3□□□□□ -1.56
ATF4P18848 RNU6-606P-201ENST00000384721 111 ntBASIC5.3□□□□□ -1.56
ATF4P18848 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ATF4P18848 RNU1-56P-201ENST00000391303 164 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC068050.1-201ENST00000394891 380 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AL109755.1-201ENST00000401791 649 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 RNA5SP177-201ENST00000410122 107 ntBASIC5.3□□□□□ -1.56
ATF4P18848 RNU6-908P-201ENST00000410160 94 ntBASIC5.3□□□□□ -1.56
ATF4P18848 RNA5SP118-201ENST00000410385 109 ntBASIC5.3□□□□□ -1.56
ATF4P18848 RNU4-65P-201ENST00000410473 140 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 GTF2IP20-201ENST00000431663 360 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF4P18848 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC073109.1-201ENST00000445066 978 ntBASIC5.3□□□□□ -1.56
ATF4P18848 SNRPGP6-201ENST00000451124 220 ntBASIC5.3□□□□□ -1.56
ATF4P18848 SRP68P2-201ENST00000456184 254 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF4P18848 AC007537.2-201ENST00000472093 511 ntBASIC5.3□□□□□ -1.56
ATF4P18848 MYL6P4-201ENST00000477911 453 ntBASIC5.3□□□□□ -1.56
ATF4P18848 RN7SL382P-201ENST00000482631 282 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC079594.1-201ENST00000489757 331 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 RN7SL775P-201ENST00000498361 336 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.3□□□□□ -1.56
ATF4P18848 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 RNU4-60P-201ENST00000517239 135 ntBASIC5.3□□□□□ -1.56
ATF4P18848 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 DEFB108D-201ENST00000527787 222 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.3□□□□□ -1.56
ATF4P18848 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF4P18848 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.3□□□□□ -1.56
ATF4P18848 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC012409.3-201ENST00000611343 981 ntBASIC5.3□□□□□ -1.56
ATF4P18848 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ATF4P18848 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.3□□□□□ -1.56
ATF4P18848 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
ATF4P18848 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
ATF4P18848 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.3□□□□□ -1.56
ATF4P18848 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATF4P18848 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.3□□□□□ -1.56
ATF4P18848 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 DDX10P1-201ENST00000448545 1933 ntBASIC5.29□□□□□ -1.56
ATF4P18848 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
ATF4P18848 AC239868.2-201ENST00000564237 4527 ntBASIC5.29□□□□□ -1.56
ATF4P18848 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ATF4P18848 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATF4P18848 Z73965.1-201ENST00000623412 2297 ntBASIC5.29□□□□□ -1.56
ATF4P18848 AC129502.1-201ENST00000623261 1654 ntBASIC5.29□□□□□ -1.56
ATF4P18848 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms