Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 CASC19-261ENST00000641853 1638 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 RNU6-236P-201ENST00000363886 106 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 MIR620-201ENST00000385232 95 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ERCC2P18074 RNU6-298P-201ENST00000390888 96 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 OR6C69P-201ENST00000394268 893 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 BTBD10P2-201ENST00000404779 676 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 BTF3P8-201ENST00000414577 526 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 LIPT1P1-201ENST00000415870 1186 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC027644.1-201ENST00000419595 298 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC2P18074 ELOCP6-201ENST00000429066 328 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 UBE2V1P1-201ENST00000430836 445 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 SDR42E1P3-201ENST00000438345 502 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 RPL7P59-201ENST00000447700 943 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC104306.1-201ENST00000449702 371 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC009220.1-201ENST00000451614 275 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 RAD23BP3-201ENST00000454157 1152 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.29□□□□□ -1.72
ERCC2P18074 ELOCP12-201ENST00000458706 328 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 RNA5SP246-201ENST00000458909 119 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 RPL21P71-201ENST00000465598 459 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 RN7SL585P-201ENST00000470538 280 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AP000893.1-201ENST00000474462 794 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AC093824.1-201ENST00000508796 343 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 IFITM8P-201ENST00000522529 394 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC2P18074 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
ERCC2P18074 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.29□□□□□ -1.72
ERCC2P18074 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.29□□□□□ -1.72
ERCC2P18074 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 KPNA2P3-201ENST00000584190 848 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 ARF4P1-201ENST00000605447 541 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AC105429.2-201ENST00000610567 517 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 MLECP1-201ENST00000615893 709 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 AL445567.2-201ENST00000618935 498 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 ZNF33CP-201ENST00000432492 2030 ntBASIC4.29□□□□□ -1.72
ERCC2P18074 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ERCC2P18074 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.29□□□□□ -1.72
ERCC2P18074 AC005261.4-201ENST00000600047 1385 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 RNU6-444P-201ENST00000383988 108 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 SNORA37-201ENST00000384504 129 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 MIR153-1-201ENST00000384914 90 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC016397.1-201ENST00000412463 242 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC008280.1-201ENST00000418851 412 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 H2AFZP6-201ENST00000444403 394 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.28□□□□□ -1.72
ERCC2P18074 BX276092.4-201ENST00000452056 248 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 RPL7AP28-201ENST00000464513 571 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC104982.1-201ENST00000478775 574 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC083829.1-201ENST00000503756 657 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 SNX5P1-201ENST00000505757 1041 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC008837.1-201ENST00000511513 412 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC109471.1-201ENST00000511631 612 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 snoZ278.1-201ENST00000517059 112 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
ERCC2P18074 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 CYCSP29-201ENST00000533731 318 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 AC087897.1-201ENST00000550134 156 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.28□□□□□ -1.72
ERCC2P18074 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ERCC2P18074 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.28□□□□□ -1.72
ERCC2P18074 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.28□□□□□ -1.72
ERCC2P18074 MTCYBP28-201ENST00000566728 1132 ntBASIC4.28□□□□□ -1.72
ERCC2P18074 AC023575.1-201ENST00000580510 358 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms