Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TPM1P09493 RNU1-75P-201ENST00000347264 129 ntBASIC4.03□□□□□ -1.76
TPM1P09493 RNU6-185P-201ENST00000384421 107 ntBASIC4.03□□□□□ -1.76
TPM1P09493 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 RNU2-37P-201ENST00000410695 177 ntBASIC4.03□□□□□ -1.76
TPM1P09493 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM1P09493 NDUFB1P1-201ENST00000435191 180 ntBASIC4.03□□□□□ -1.76
TPM1P09493 MED6P1-201ENST00000439659 713 ntBASIC4.03□□□□□ -1.76
TPM1P09493 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 AC010655.1-201ENST00000449336 292 ntBASIC4.03□□□□□ -1.76
TPM1P09493 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM1P09493 TMED11P-201ENST00000479478 690 ntBASIC4.03□□□□□ -1.76
TPM1P09493 HMGB3P14-201ENST00000494195 599 ntBASIC4.03□□□□□ -1.76
TPM1P09493 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.03□□□□□ -1.76
TPM1P09493 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TPM1P09493 RNU2-58P-201ENST00000516403 183 ntBASIC4.03□□□□□ -1.76
TPM1P09493 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 MRPL49P2-201ENST00000521066 465 ntBASIC4.03□□□□□ -1.76
TPM1P09493 NDUFB9P3-201ENST00000521269 501 ntBASIC4.03□□□□□ -1.76
TPM1P09493 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.03□□□□□ -1.76
TPM1P09493 AC051619.2-201ENST00000559063 397 ntBASIC4.03□□□□□ -1.76
TPM1P09493 MIR548Y-201ENST00000582739 110 ntBASIC4.03□□□□□ -1.76
TPM1P09493 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.03□□□□□ -1.76
TPM1P09493 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.03□□□□□ -1.76
TPM1P09493 AC079684.1-201ENST00000621405 437 ntBASIC4.03□□□□□ -1.76
TPM1P09493 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.03□□□□□ -1.76
TPM1P09493 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TPM1P09493 RLIMP1-201ENST00000339626 1680 ntBASIC4.03□□□□□ -1.76
TPM1P09493 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TPM1P09493 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 RNU6-31P-201ENST00000384388 108 ntBASIC4.02□□□□□ -1.77
TPM1P09493 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TPM1P09493 RPL21P65-201ENST00000406094 466 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AJ239321.1-201ENST00000424255 564 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM1P09493 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 AC023347.2-201ENST00000433994 462 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 CFTRP1-201ENST00000456646 183 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.02□□□□□ -1.77
TPM1P09493 RPS4XP15-201ENST00000489210 795 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AL035404.1-201ENST00000497982 568 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.02□□□□□ -1.77
TPM1P09493 PHBP14-201ENST00000512887 367 ntBASIC4.02□□□□□ -1.77
TPM1P09493 RN7SKP234-201ENST00000517173 224 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 AP004242.1-201ENST00000533701 349 ntBASIC4.02□□□□□ -1.77
TPM1P09493 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.02□□□□□ -1.77
TPM1P09493 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM1P09493 AC092868.3-201ENST00000560515 784 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AL845331.3-202ENST00000562856 261 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.02□□□□□ -1.77
TPM1P09493 AP004372.1-201ENST00000604842 844 ntBASIC4.02□□□□□ -1.77
TPM1P09493 MIR6500-201ENST00000622700 86 ntBASIC4.02□□□□□ -1.77
TPM1P09493 AC112484.5-201ENST00000624189 228 ntBASIC4.02□□□□□ -1.77
TPM1P09493 MIR4278-201ENST00000636094 69 ntBASIC4.02□□□□□ -1.77
TPM1P09493 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TPM1P09493 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TPM1P09493 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM1P09493 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM1P09493 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM1P09493 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM1P09493 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM1P09493 AC073073.2-201ENST00000609827 2578 ntBASIC4.01□□□□□ -1.77
TPM1P09493 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.01□□□□□ -1.77
TPM1P09493 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
TPM1P09493 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TPM1P09493 SKINT1L-201ENST00000401057 817 ntBASIC4.01□□□□□ -1.77
TPM1P09493 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TPM1P09493 AC008065.1-201ENST00000428525 348 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC073143.1-201ENST00000436316 395 ntBASIC4.01□□□□□ -1.77
TPM1P09493 RPS7P5-201ENST00000441482 581 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC023512.1-201ENST00000444513 499 ntBASIC4.01□□□□□ -1.77
TPM1P09493 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC078785.3-201ENST00000476607 425 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC020893.1-201ENST00000502452 580 ntBASIC4.01□□□□□ -1.77
TPM1P09493 TXNP6-201ENST00000510190 310 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM1P09493 AC023141.12-201ENST00000512399 199 ntBASIC4.01□□□□□ -1.77
TPM1P09493 RNU2-27P-201ENST00000516185 142 ntBASIC4.01□□□□□ -1.77
TPM1P09493 OR7E13P-201ENST00000526052 910 ntBASIC4.01□□□□□ -1.77
TPM1P09493 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.01□□□□□ -1.77
TPM1P09493 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.01□□□□□ -1.77
TPM1P09493 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms