Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.96□□□□□ -1.94
CTSDP07339 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.96□□□□□ -1.94
CTSDP07339 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 AC008507.1-201ENST00000587506 734 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC007687.1-201ENST00000602704 304 ntBASIC2.96□□□□□ -1.94
CTSDP07339 GMCL1P2-201ENST00000605230 823 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.96□□□□□ -1.94
CTSDP07339 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTSDP07339 MIR6875-201ENST00000617506 72 ntBASIC2.96□□□□□ -1.94
CTSDP07339 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.96□□□□□ -1.94
CTSDP07339 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTSDP07339 AC018816.2-201ENST00000621460 353 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC068724.3-201ENST00000625906 87 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RNA5SP196-201ENST00000625967 102 ntBASIC2.96□□□□□ -1.94
CTSDP07339 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.96□□□□□ -1.94
CTSDP07339 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 AL353746.1-201ENST00000566293 6881 ntBASIC2.96□□□□□ -1.94
CTSDP07339 AC007496.3-201ENST00000624987 3443 ntBASIC2.96□□□□□ -1.94
CTSDP07339 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
CTSDP07339 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 TRGV7-201ENST00000427089 353 ntBASIC2.95□□□□□ -1.94
CTSDP07339 FAR1P1-201ENST00000427163 934 ntBASIC2.95□□□□□ -1.94
CTSDP07339 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.95□□□□□ -1.94
CTSDP07339 HMGN1P18-201ENST00000457642 277 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC023598.1-201ENST00000472521 361 ntBASIC2.95□□□□□ -1.94
CTSDP07339 TPT1P3-201ENST00000492841 512 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 AC010460.1-201ENST00000507087 466 ntBASIC2.95□□□□□ -1.94
CTSDP07339 TXNP6-201ENST00000510190 310 ntBASIC2.95□□□□□ -1.94
CTSDP07339 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.95□□□□□ -1.94
CTSDP07339 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.95□□□□□ -1.94
CTSDP07339 UBE2NP1-201ENST00000545592 458 ntBASIC2.95□□□□□ -1.94
CTSDP07339 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.95□□□□□ -1.94
CTSDP07339 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.95□□□□□ -1.94
CTSDP07339 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.95□□□□□ -1.94
CTSDP07339 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 MIR4286-201ENST00000580651 93 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.95□□□□□ -1.94
CTSDP07339 VN1R84P-201ENST00000593697 235 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.95□□□□□ -1.94
CTSDP07339 AC011816.2-201ENST00000607089 556 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.95□□□□□ -1.94
CTSDP07339 AC016717.3-201ENST00000624730 554 ntBASIC2.95□□□□□ -1.94
CTSDP07339 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.95□□□□□ -1.94
CTSDP07339 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CTSDP07339 AC007823.1-201ENST00000569932 1566 ntBASIC2.95□□□□□ -1.94
CTSDP07339 AL133383.2-201ENST00000622958 2336 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC110792.3-201ENST00000595906 1614 ntBASIC2.94□□□□□ -1.94
CTSDP07339 MFSD8-233ENST00000641482 4860 ntBASIC2.94□□□□□ -1.94
CTSDP07339 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.94□□□□□ -1.94
CTSDP07339 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CTSDP07339 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
CTSDP07339 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 RNU6-213P-201ENST00000384051 104 ntBASIC2.94□□□□□ -1.94
CTSDP07339 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 PPIAP31-201ENST00000405422 495 ntBASIC2.94□□□□□ -1.94
CTSDP07339 RNA5SP293-201ENST00000410527 113 ntBASIC2.94□□□□□ -1.94
CTSDP07339 RN7SKP263-201ENST00000411194 309 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTSDP07339 AC245291.1-201ENST00000419501 328 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC093084.1-201ENST00000424233 687 ntBASIC2.94□□□□□ -1.94
CTSDP07339 RPL23AP82-202ENST00000427528 469 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 AC092013.1-201ENST00000438795 332 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 AC125238.1-201ENST00000448842 249 ntBASIC2.94□□□□□ -1.94
CTSDP07339 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 CENPBD1P1-201ENST00000464061 469 ntBASIC2.94□□□□□ -1.94
CTSDP07339 RPL23AP67-201ENST00000465341 474 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AP002884.2-201ENST00000471647 395 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 IGHV3-76-201ENST00000522465 295 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.94□□□□□ -1.94
CTSDP07339 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.94□□□□□ -1.94
CTSDP07339 AC006518.1-201ENST00000541449 943 ntBASIC2.94□□□□□ -1.94
CTSDP07339 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.94□□□□□ -1.94
CTSDP07339 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms