Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC009501.3-201ENST00000605001 1352 ntBASIC3.25□□□□□ -1.89
CD74P04233 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 AC090337.1-201ENST00000579651 2074 ntBASIC3.24□□□□□ -1.89
CD74P04233 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.24□□□□□ -1.89
CD74P04233 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 AL161909.1-201ENST00000397390 712 ntBASIC3.24□□□□□ -1.89
CD74P04233 SNORA57.3-201ENST00000411095 141 ntBASIC3.24□□□□□ -1.89
CD74P04233 HIGD1AP12-201ENST00000427832 281 ntBASIC3.24□□□□□ -1.89
CD74P04233 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 RSL24D1P8-201ENST00000434442 492 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 RPS3AP54-201ENST00000435535 734 ntBASIC3.24□□□□□ -1.89
CD74P04233 Z95152.1-201ENST00000453556 656 ntBASIC3.24□□□□□ -1.89
CD74P04233 TPRKBP1-201ENST00000456243 481 ntBASIC3.24□□□□□ -1.89
CD74P04233 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.24□□□□□ -1.89
CD74P04233 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.24□□□□□ -1.89
CD74P04233 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.24□□□□□ -1.89
CD74P04233 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.24□□□□□ -1.89
CD74P04233 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 RN7SKP60-201ENST00000516985 239 ntBASIC3.24□□□□□ -1.89
CD74P04233 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 AC026616.1-201ENST00000523157 525 ntBASIC3.24□□□□□ -1.89
CD74P04233 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 YPEL5P3-201ENST00000547227 352 ntBASIC3.24□□□□□ -1.89
CD74P04233 NOP56P3-201ENST00000549457 385 ntBASIC3.24□□□□□ -1.89
CD74P04233 AL049870.4-201ENST00000555741 486 ntBASIC3.24□□□□□ -1.89
CD74P04233 ZNF192P1-203ENST00000565888 810 ntBASIC3.24□□□□□ -1.89
CD74P04233 MIR4277-201ENST00000578298 84 ntBASIC3.24□□□□□ -1.89
CD74P04233 KLKP1-201ENST00000595979 403 ntBASIC3.24□□□□□ -1.89
CD74P04233 MTCO3P22-201ENST00000603219 784 ntBASIC3.24□□□□□ -1.89
CD74P04233 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.24□□□□□ -1.89
CD74P04233 MIR6868-201ENST00000611215 58 ntBASIC3.24□□□□□ -1.89
CD74P04233 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD74P04233 AC245389.2-201ENST00000616023 576 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC243756.2-201ENST00000618406 463 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC242843.1-201ENST00000618702 573 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.24□□□□□ -1.89
CD74P04233 MIR6758-201ENST00000620653 63 ntBASIC3.24□□□□□ -1.89
CD74P04233 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC020978.9-201ENST00000624380 1141 ntBASIC3.24□□□□□ -1.89
CD74P04233 MIR4278-201ENST00000636094 69 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC000367.1-201ENST00000452711 1766 ntBASIC3.24□□□□□ -1.89
CD74P04233 AC058791.1-201ENST00000608412 3198 ntBASIC3.24□□□□□ -1.89
CD74P04233 CCT8P1-201ENST00000413611 1657 ntBASIC3.24□□□□□ -1.89
CD74P04233 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.23□□□□□ -1.89
CD74P04233 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD74P04233 RPL32P3-201ENST00000359025 275 ntBASIC3.23□□□□□ -1.89
CD74P04233 RNA5SP189-201ENST00000364920 115 ntBASIC3.23□□□□□ -1.89
CD74P04233 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.23□□□□□ -1.89
CD74P04233 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
CD74P04233 OR5BE1P-201ENST00000425977 939 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC023141.6-201ENST00000429418 337 ntBASIC3.23□□□□□ -1.89
CD74P04233 USP9YP31-201ENST00000431405 881 ntBASIC3.23□□□□□ -1.89
CD74P04233 ELOCP11-201ENST00000436690 332 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC105402.2-201ENST00000438503 358 ntBASIC3.23□□□□□ -1.89
CD74P04233 ACTR3P2-201ENST00000439585 1257 ntBASIC3.23□□□□□ -1.89
CD74P04233 ELOCP16-201ENST00000444494 332 ntBASIC3.23□□□□□ -1.89
CD74P04233 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
CD74P04233 RPL23AP24-201ENST00000458203 385 ntBASIC3.23□□□□□ -1.89
CD74P04233 FTH1P2-201ENST00000466086 412 ntBASIC3.23□□□□□ -1.89
CD74P04233 AL132838.2-201ENST00000492041 314 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC026979.1-201ENST00000492525 396 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC005921.1-201ENST00000510589 286 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.23□□□□□ -1.89
CD74P04233 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.23□□□□□ -1.89
CD74P04233 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 OR4A12P-201ENST00000530847 918 ntBASIC3.23□□□□□ -1.89
CD74P04233 PDCL2P2-201ENST00000533651 189 ntBASIC3.23□□□□□ -1.89
CD74P04233 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.23□□□□□ -1.89
CD74P04233 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.23□□□□□ -1.89
CD74P04233 AC068831.4-201ENST00000556118 109 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 AC022146.1-201ENST00000595307 847 ntBASIC3.23□□□□□ -1.89
CD74P04233 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.23□□□□□ -1.89
CD74P04233 AL392112.1-201ENST00000605115 829 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC090525.3-201ENST00000605601 189 ntBASIC3.23□□□□□ -1.89
CD74P04233 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.23□□□□□ -1.89
CD74P04233 AC015802.5-201ENST00000607478 399 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC012467.1-201ENST00000607740 256 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
CD74P04233 CR589904.2-201ENST00000612533 440 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC104307.1-201ENST00000616142 196 ntBASIC3.23□□□□□ -1.89
CD74P04233 AC092628.2-201ENST00000622492 339 ntBASIC3.23□□□□□ -1.89
CD74P04233 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD74P04233 OR5BE1P-202ENST00000641168 1176 ntBASIC3.23□□□□□ -1.89
CD74P04233 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.23□□□□□ -1.89
CD74P04233 AC022031.1-201ENST00000585985 2593 ntBASIC3.23□□□□□ -1.89
CD74P04233 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CD74P04233 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CD74P04233 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms