Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC004552.1-201ENST00000419089 348 ntBASIC2.05□□□□□ -2.08
APOBP04114 IFNNP1-201ENST00000429219 553 ntBASIC2.05□□□□□ -2.08
APOBP04114 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 AC021205.2-201ENST00000480069 347 ntBASIC2.05□□□□□ -2.08
APOBP04114 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 MRPS35P3-201ENST00000603189 709 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.05□□□□□ -2.08
APOBP04114 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 U3.12-201ENST00000364498 214 ntBASIC2.04□□□□□ -2.08
APOBP04114 HMGB3P20-201ENST00000417997 600 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC092809.1-201ENST00000441469 474 ntBASIC2.04□□□□□ -2.08
APOBP04114 AL357552.1-201ENST00000445254 415 ntBASIC2.04□□□□□ -2.08
APOBP04114 USP9YP2-201ENST00000504503 1000 ntBASIC2.04□□□□□ -2.08
APOBP04114 USP9YP1-201ENST00000513521 1002 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.04□□□□□ -2.08
APOBP04114 CYP4A43P-201ENST00000568156 121 ntBASIC2.04□□□□□ -2.08
APOBP04114 AP000255.1-201ENST00000610276 676 ntBASIC2.04□□□□□ -2.08
APOBP04114 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.04□□□□□ -2.08
APOBP04114 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 AC009313.2-201ENST00000417893 1941 ntBASIC2.04□□□□□ -2.08
APOBP04114 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
APOBP04114 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 MIR448-201ENST00000362131 111 ntBASIC2.04□□□□□ -2.08
APOBP04114 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.04□□□□□ -2.08
APOBP04114 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.04□□□□□ -2.08
APOBP04114 AC010469.1-201ENST00000463864 576 ntBASIC2.04□□□□□ -2.08
APOBP04114 RPS29P21-201ENST00000496272 170 ntBASIC2.04□□□□□ -2.08
APOBP04114 HMGB1P3-201ENST00000502802 616 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.04□□□□□ -2.08
APOBP04114 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.04□□□□□ -2.08
APOBP04114 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
APOBP04114 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.04□□□□□ -2.08
APOBP04114 RNU6-304P-201ENST00000364855 107 ntBASIC2.04□□□□□ -2.08
APOBP04114 RPL21P109-201ENST00000422213 475 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC233981.1-201ENST00000423224 461 ntBASIC2.04□□□□□ -2.08
APOBP04114 RNA5SP103-201ENST00000459503 118 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.04□□□□□ -2.08
APOBP04114 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.04□□□□□ -2.08
APOBP04114 FTH1P11-201ENST00000517577 551 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.04□□□□□ -2.08
APOBP04114 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 UBL5P2-201ENST00000583788 219 ntBASIC2.04□□□□□ -2.08
APOBP04114 AC006557.5-201ENST00000603126 811 ntBASIC2.04□□□□□ -2.08
APOBP04114 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.04□□□□□ -2.08
APOBP04114 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.04□□□□□ -2.08
APOBP04114 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
APOBP04114 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
APOBP04114 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 SNORA67.4-201ENST00000384688 142 ntBASIC2.03□□□□□ -2.08
APOBP04114 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.03□□□□□ -2.08
APOBP04114 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.03□□□□□ -2.08
APOBP04114 OR4A12P-201ENST00000530847 918 ntBASIC2.03□□□□□ -2.08
APOBP04114 AC234778.2-201ENST00000566241 354 ntBASIC2.03□□□□□ -2.08
APOBP04114 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 MIR7111-201ENST00000619751 72 ntBASIC2.03□□□□□ -2.08
APOBP04114 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
APOBP04114 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 AC068647.1-201ENST00000489539 2265 ntBASIC2.03□□□□□ -2.08
APOBP04114 AL078595.2-201ENST00000605309 1780 ntBASIC2.03□□□□□ -2.08
APOBP04114 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.03□□□□□ -2.08
APOBP04114 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.03□□□□□ -2.08
APOBP04114 MIR4524B-201ENST00000581569 115 ntBASIC2.03□□□□□ -2.08
APOBP04114 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.03□□□□□ -2.08
APOBP04114 AC006946.3-201ENST00000609791 756 ntBASIC2.03□□□□□ -2.08
APOBP04114 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.03□□□□□ -2.08
APOBP04114 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.03□□□□□ -2.08
APOBP04114 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 RHOT1P2-201ENST00000366423 333 ntBASIC2.03□□□□□ -2.08
APOBP04114 MIR512-1-201ENST00000384913 84 ntBASIC2.03□□□□□ -2.08
APOBP04114 FTLP19-201ENST00000433300 394 ntBASIC2.03□□□□□ -2.08
APOBP04114 AL133477.1-201ENST00000457472 514 ntBASIC2.03□□□□□ -2.08
APOBP04114 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 AP001207.2-201ENST00000519490 539 ntBASIC2.03□□□□□ -2.08
APOBP04114 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.08
APOBP04114 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.03□□□□□ -2.08
APOBP04114 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOBP04114 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
APOBP04114 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.03□□□□□ -2.09
APOBP04114 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.03□□□□□ -2.09
APOBP04114 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms