Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC022415.1-202ENST00000486612 523 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 RN7SL214P-201ENST00000487317 265 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.96□□□□□ -1.46
PDGFAP04085 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 PRMT5P1-201ENST00000514351 598 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 SCARNA21.2-201ENST00000516600 166 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 SUMO2P20-201ENST00000520803 283 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFAP04085 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC079905.1-201ENST00000549280 475 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.96□□□□□ -1.46
PDGFAP04085 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFAP04085 MIR3171-201ENST00000584270 74 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AC011477.5-201ENST00000586571 259 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC123786.2-201ENST00000603459 275 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC024884.1-201ENST00000620583 399 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.96□□□□□ -1.46
PDGFAP04085 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDGFAP04085 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFAP04085 AC091305.2-201ENST00000624049 1576 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 TNPO1P2-201ENST00000426249 2665 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFAP04085 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFAP04085 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFAP04085 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.96□□□□□ -1.46
PDGFAP04085 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDGFAP04085 AP004289.2-201ENST00000444413 1457 ntBASIC5.96□□□□□ -1.46
PDGFAP04085 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFAP04085 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC004972.1-201ENST00000623934 2209 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC023245.2-201ENST00000530760 2978 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDGFAP04085 THAP12P4-201ENST00000528321 2266 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDGFAP04085 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 Y_RNA.22-201ENST00000362492 102 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RNU4-20P-201ENST00000365601 151 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 SNORA51.9-201ENST00000384295 124 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RNU6-831P-201ENST00000384548 107 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RN7SKP229-201ENST00000410465 302 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RPL26P29-201ENST00000415623 438 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 OR1AA1P-201ENST00000419597 916 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 MED13P1-201ENST00000428342 171 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 GTF2IP13-201ENST00000438487 386 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 CRYGGP-201ENST00000443337 145 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC012512.1-201ENST00000446594 718 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFAP04085 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 RNU7-182P-201ENST00000459009 62 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC104164.1-201ENST00000460282 590 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 RPL7P42-201ENST00000481005 679 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 MTCO1P29-201ENST00000496868 288 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 LSM3P4-201ENST00000502948 309 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC004062.1-201ENST00000509926 645 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 TTC39CP1-201ENST00000512513 755 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 LSM3P2-201ENST00000551246 273 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC093278.2-201ENST00000564956 2485 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 COX6CP3-201ENST00000580869 223 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC008507.3-201ENST00000585753 472 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 DHX40P1-201ENST00000588725 1412 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 AL121992.2-201ENST00000606262 256 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC116312.1-201ENST00000606841 314 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 AL355802.3-201ENST00000607571 545 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 AL049794.2-201ENST00000616301 365 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 AL034546.1-201ENST00000623740 3693 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFAP04085 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFAP04085 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDGFAP04085 AC011493.1-201ENST00000596753 1632 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AL122126.1-201ENST00000546905 1318 ntBASIC5.95□□□□□ -1.46
PDGFAP04085 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PDGFAP04085 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFAP04085 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms