Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL603766.1-201ENST00000407763 664 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC241520.1-201ENST00000422654 1099 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 RPL7P28-201ENST00000437739 740 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC000041.1-201ENST00000439655 175 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 RPL6P5-201ENST00000445678 828 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 RPL7P32-201ENST00000457119 744 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 MTND2P28-201ENST00000457540 1044 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.84□□□□□ -1.79
MT-ND1P03886 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AK3P4-201ENST00000504283 583 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC111000.3-201ENST00000508057 576 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC093824.1-201ENST00000508796 343 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 TPT1P8-201ENST00000510120 555 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 RNA5SP519-201ENST00000516480 119 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 MIR2114-201ENST00000516645 80 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC087894.1-201ENST00000538359 518 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AP003717.3-201ENST00000544832 1180 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.84□□□□□ -1.79
MT-ND1P03886 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 SERPINE4P-201ENST00000554978 281 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.84□□□□□ -1.79
MT-ND1P03886 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 MIR4760-201ENST00000585040 80 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.84□□□□□ -1.79
MT-ND1P03886 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
MT-ND1P03886 AC104662.1-201ENST00000604448 511 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 RNA5SP108-201ENST00000605921 117 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 FRG1HP-204ENST00000617940 757 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC017104.5-201ENST00000637647 639 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC132825.7-201ENST00000638744 335 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 AC006927.2-201ENST00000639256 389 ntBASIC3.84□□□□□ -1.79
MT-ND1P03886 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
MT-ND1P03886 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
MT-ND1P03886 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.84□□□□□ -1.8
MT-ND1P03886 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 RNU6-1293P-201ENST00000384077 107 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RNU6-356P-201ENST00000384140 107 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 PRRC2CP1-201ENST00000404428 159 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RNU2-21P-201ENST00000410368 188 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RN7SKP56-201ENST00000410513 331 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RN7SKP235-201ENST00000410662 305 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.83□□□□□ -1.8
MT-ND1P03886 RPS15AP40-201ENST00000419621 391 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
MT-ND1P03886 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.83□□□□□ -1.8
MT-ND1P03886 MRPL35P4-201ENST00000453682 566 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC109327.1-201ENST00000471666 403 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC231760.1-201ENST00000498002 260 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 OR8G5-201ENST00000524943 1041 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.83□□□□□ -1.8
MT-ND1P03886 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.83□□□□□ -1.8
MT-ND1P03886 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC135001.1-201ENST00000544546 283 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
MT-ND1P03886 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC069431.2-201ENST00000604149 1099 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AL451044.1-201ENST00000604867 238 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC099785.1-201ENST00000605697 437 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.83□□□□□ -1.8
MT-ND1P03886 AC027449.1-201ENST00000608890 407 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RN7SL722P-201ENST00000617780 284 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RN7SL565P-201ENST00000618246 284 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC018926.3-201ENST00000618841 406 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 MIR7703-201ENST00000620784 77 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 RNU6-156P-201ENST00000621869 107 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC023510.2-201ENST00000622162 746 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 MIR4496-201ENST00000635896 61 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 AC099654.9-201ENST00000637055 678 ntBASIC3.83□□□□□ -1.8
MT-ND1P03886 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.83□□□□□ -1.8
MT-ND1P03886 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms