Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TRBV12-1-201ENST00000479785 344 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 USP9YP2-201ENST00000504503 1000 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.13□□□□□ -1.91
SPTA1P02549 USP9YP1-201ENST00000513521 1002 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 RN7SKP132-201ENST00000516001 208 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.13□□□□□ -1.91
SPTA1P02549 HIGD1AP1-201ENST00000550979 275 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC005476.1-201ENST00000554427 397 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.13□□□□□ -1.91
SPTA1P02549 AC068020.1-201ENST00000594215 661 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 MIR7843-201ENST00000622274 79 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
SPTA1P02549 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SPTA1P02549 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPTA1P02549 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPTA1P02549 AC138393.1-206ENST00000540997 1886 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.12□□□□□ -1.91
SPTA1P02549 NPM1P37-201ENST00000403105 874 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.12□□□□□ -1.91
SPTA1P02549 RNA5SP184-201ENST00000411071 108 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 LIPT1P1-201ENST00000415870 1186 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AC096638.2-201ENST00000434965 711 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AL603825.1-201ENST00000438481 80 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AC105272.1-201ENST00000438604 198 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 SLC31A1P1-201ENST00000451221 567 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.12□□□□□ -1.91
SPTA1P02549 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.12□□□□□ -1.91
SPTA1P02549 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.12□□□□□ -1.91
SPTA1P02549 RNA5SP24-201ENST00000516478 95 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 CYP4A43P-201ENST00000568156 121 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AL354976.1-201ENST00000613843 387 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.12□□□□□ -1.91
SPTA1P02549 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.12□□□□□ -1.91
SPTA1P02549 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.12□□□□□ -1.91
SPTA1P02549 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.12□□□□□ -1.91
SPTA1P02549 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 AC007685.1-201ENST00000329806 452 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 RNU1-18P-201ENST00000363062 164 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 SEPT7P2-202ENST00000398921 823 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.12□□□□□ -1.91
SPTA1P02549 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.12□□□□□ -1.91
SPTA1P02549 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.12□□□□□ -1.91
SPTA1P02549 AC009464.1-201ENST00000615731 469 ntBASIC3.12□□□□□ -1.91
SPTA1P02549 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPTA1P02549 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
SPTA1P02549 AL031679.1-201ENST00000400616 525 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 RSL24D1P4-201ENST00000400938 484 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 VN1R8P-201ENST00000407739 893 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.11□□□□□ -1.91
SPTA1P02549 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
SPTA1P02549 AC008489.1-201ENST00000524271 483 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SPTA1P02549 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 AC022893.2-201ENST00000564832 3296 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.11□□□□□ -1.91
SPTA1P02549 AC006445.1-201ENST00000491925 405 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 FCF1P3-201ENST00000496394 590 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 AC017037.2-201ENST00000513850 890 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 AC100770.1-201ENST00000532310 322 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.11□□□□□ -1.91
SPTA1P02549 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.11□□□□□ -1.91
SPTA1P02549 AL049781.1-201ENST00000623195 3585 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 IPO8P1-201ENST00000455509 3109 ntBASIC3.11□□□□□ -1.91
SPTA1P02549 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.11□□□□□ -1.91
SPTA1P02549 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SPTA1P02549 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC018529.3-201ENST00000624212 2254 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 U3.39-201ENST00000408569 239 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 RPS20P1-201ENST00000434853 354 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.1□□□□□ -1.91
SPTA1P02549 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC009852.2-201ENST00000567898 485 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC067852.3-201ENST00000589177 561 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.1□□□□□ -1.91
SPTA1P02549 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SPTA1P02549 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPTA1P02549 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SPTA1P02549 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.1□□□□□ -1.91
SPTA1P02549 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPTA1P02549 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SPTA1P02549 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms