Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 KCTD9P6-201ENST00000522306 950 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AP000926.4-201ENST00000527351 454 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.96□□□□□ -1.78
COL4A1P02462 CYP2C60P-201ENST00000566088 139 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A1P02462 MTCO3P22-201ENST00000603219 784 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 AC119674.1-212ENST00000641155 993 ntBASIC3.96□□□□□ -1.78
COL4A1P02462 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL4A1P02462 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
COL4A1P02462 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
COL4A1P02462 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.95□□□□□ -1.78
COL4A1P02462 MIR30E-201ENST00000362104 92 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL4A1P02462 AL024507.1-201ENST00000412741 274 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 AL356968.1-201ENST00000416622 474 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 REREP1Y-201ENST00000422655 198 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 AC008065.1-201ENST00000428525 348 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 FTLP19-201ENST00000433300 394 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 REREP2Y-201ENST00000439103 200 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.95□□□□□ -1.78
COL4A1P02462 MIR2276-201ENST00000516886 89 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.95□□□□□ -1.78
COL4A1P02462 LARP7P3-201ENST00000579888 337 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.95□□□□□ -1.78
COL4A1P02462 AL365400.2-201ENST00000605604 902 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.95□□□□□ -1.78
COL4A1P02462 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
COL4A1P02462 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.95□□□□□ -1.78
COL4A1P02462 AC007390.2-201ENST00000606229 3803 ntBASIC3.95□□□□□ -1.78
COL4A1P02462 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL4A1P02462 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL4A1P02462 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 RNU6-1279P-201ENST00000383917 103 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 OR6K4P-201ENST00000423179 955 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 AC008264.1-201ENST00000447612 367 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 OR1AB1P-201ENST00000585564 761 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 MIR4727-201ENST00000622232 55 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 AL356489.2-201ENST00000566968 3528 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 MIR422A-201ENST00000362286 90 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 RPL7P8-201ENST00000411964 730 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC000041.1-201ENST00000439655 175 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 HMGB3P9-201ENST00000441799 583 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 AC069540.1-201ENST00000446320 988 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 RPL23AP73-201ENST00000492507 471 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.94□□□□□ -1.78
COL4A1P02462 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.94□□□□□ -1.78
COL4A1P02462 AC034105.3-201ENST00000565294 442 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 AL162574.2-201ENST00000614618 657 ntBASIC3.94□□□□□ -1.78
COL4A1P02462 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.94□□□□□ -1.78
COL4A1P02462 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL4A1P02462 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A1P02462 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A1P02462 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL4A1P02462 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL4A1P02462 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL4A1P02462 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL4A1P02462 AL121834.1-202ENST00000404494 277 ntBASIC3.93□□□□□ -1.78
COL4A1P02462 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A1P02462 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.93□□□□□ -1.78
COL4A1P02462 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
COL4A1P02462 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms