Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC008494.2-201ENST00000514544 370 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFBP01127 EIF1P6-201ENST00000600054 334 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 LLPHP1-201ENST00000603571 367 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC005014.3-201ENST00000605985 190 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AL136370.1-201ENST00000608166 691 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFBP01127 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PDGFBP01127 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PDGFBP01127 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 AL359922.3-201ENST00000624779 1670 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 LINC00561-201ENST00000565815 2738 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFBP01127 SNORD3H-201ENST00000384486 214 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 RPL36AP10-201ENST00000421785 322 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AC073310.1-201ENST00000423226 1033 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 EIF1P3-201ENST00000423841 334 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFBP01127 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFBP01127 OR4F13P-201ENST00000428478 931 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 RPL21P91-201ENST00000429231 479 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 RPS4XP4-201ENST00000443195 763 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFBP01127 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFBP01127 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFBP01127 RPS26P28-201ENST00000470806 348 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFBP01127 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.18□□□□□ -1.74
PDGFBP01127 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFBP01127 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFBP01127 AC008565.1-201ENST00000509046 885 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 RPL7L1P13-201ENST00000511702 739 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 RPL23AP94-201ENST00000512518 302 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AC027338.1-201ENST00000514840 825 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.18□□□□□ -1.74
PDGFBP01127 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFBP01127 RNU6-467P-201ENST00000517027 110 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 C1DP5-201ENST00000525775 383 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFBP01127 AC024224.1-201ENST00000538284 609 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.18□□□□□ -1.74
PDGFBP01127 AC093510.2-201ENST00000562820 896 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AC015911.5-201ENST00000587076 451 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AC015726.1-201ENST00000602353 681 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 ELOCP35-201ENST00000604289 336 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 AC234782.5-201ENST00000617723 324 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 MIR7975-201ENST00000619350 68 ntBASIC4.18□□□□□ -1.74
PDGFBP01127 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDGFBP01127 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PDGFBP01127 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFBP01127 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFBP01127 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFBP01127 AC107068.1-201ENST00000563286 4218 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFBP01127 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 RN7SKP44-201ENST00000363602 316 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 ATP5F1P6-201ENST00000402768 767 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 HMGB3P18-201ENST00000406327 590 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 NUP35P2-201ENST00000416748 943 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFBP01127 UBE2V1P6-201ENST00000430840 422 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AL512661.1-201ENST00000434586 1253 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFBP01127 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFBP01127 AC006011.1-201ENST00000442758 349 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC073587.1-201ENST00000447093 876 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFBP01127 MTND2P39-201ENST00000457230 764 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFBP01127 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFBP01127 AL358832.1-201ENST00000497800 389 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFBP01127 AC090071.1-201ENST00000507713 644 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFBP01127 RNA5SP303-201ENST00000516192 130 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms