Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC114546.3-201ENST00000623582 1734 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 DDX6P1-205ENST00000441966 1436 ntBASIC3.95□□□□□ -1.78
CTDNEP1O95476 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.95□□□□□ -1.78
CTDNEP1O95476 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDNEP1O95476 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL161912.2-201ENST00000565707 3007 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 RNU4-7P-201ENST00000364758 141 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 OR6K3-202ENST00000368146 996 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 MIR490-201ENST00000384865 128 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL356967.1-201ENST00000406305 431 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 RNA5SP31-201ENST00000411144 127 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL356968.1-201ENST00000416622 474 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 RPS6P12-201ENST00000432491 726 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL035458.1-201ENST00000433096 585 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC092641.1-201ENST00000440229 772 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL354710.1-201ENST00000453641 246 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC002456.2-201ENST00000509356 380 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 SAP18P1-201ENST00000512058 390 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 CCNHP1-201ENST00000513311 678 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 SNORA70.17-201ENST00000516449 133 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 PAICSP4-201ENST00000517543 1253 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AP001636.2-201ENST00000525517 696 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 MED28P5-201ENST00000528254 438 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 OR8X1P-201ENST00000534542 869 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC123786.2-201ENST00000603459 275 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL139286.1-201ENST00000604465 483 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AL034351.1-201ENST00000605288 668 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 OR6R2P-201ENST00000609216 300 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC110801.1-201ENST00000623590 212 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 AC244258.1-201ENST00000637553 1071 ntBASIC3.94□□□□□ -1.78
CTDNEP1O95476 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDNEP1O95476 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDNEP1O95476 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AL355596.1-201ENST00000565399 3996 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 MIR554-201ENST00000384874 96 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 RN7SKP285-201ENST00000410137 318 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AL513174.1-201ENST00000423182 629 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC008264.1-201ENST00000447612 367 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AL672167.3-201ENST00000465951 960 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 RPL21P13-201ENST00000488305 481 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC025857.1-201ENST00000525252 377 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC079791.1-201ENST00000605356 973 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC138473.1-201ENST00000605717 526 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AL356274.1-201ENST00000617064 410 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC134882.1-201ENST00000603738 1676 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 OR10AB1P-202ENST00000641219 1686 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 USP8P1-201ENST00000494673 3183 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTDNEP1O95476 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CTDNEP1O95476 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 SPATA2P1-201ENST00000431223 2055 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.93□□□□□ -1.78
CTDNEP1O95476 AC092079.1-201ENST00000558620 1985 ntBASIC3.93□□□□□ -1.78
CTDNEP1O95476 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 TNPO1P3-201ENST00000436471 2662 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC007342.9-201ENST00000623877 1385 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 RNU1-70P-201ENST00000362618 164 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTDNEP1O95476 RNU6-146P-201ENST00000384602 108 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDNEP1O95476 AC126124.2-201ENST00000413542 321 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 RPS12P23-201ENST00000419579 400 ntBASIC3.92□□□□□ -1.78
CTDNEP1O95476 GLRXP1-201ENST00000423261 334 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms