Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
MBD4O95243 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
MBD4O95243 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MBD4O95243 SPRR2C-201ENST00000290702 219 ntBASIC4.98□□□□□ -1.61
MBD4O95243 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.98□□□□□ -1.61
MBD4O95243 MIR372-201ENST00000362225 67 ntBASIC4.98□□□□□ -1.61
MBD4O95243 TMSB4XP8-201ENST00000402089 135 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AL121834.1-202ENST00000404494 277 ntBASIC4.98□□□□□ -1.61
MBD4O95243 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.98□□□□□ -1.61
MBD4O95243 TMSB4XP6-201ENST00000415187 135 ntBASIC4.98□□□□□ -1.61
MBD4O95243 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 TMSB4XP1-201ENST00000424567 135 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AL513175.1-201ENST00000431492 780 ntBASIC4.98□□□□□ -1.61
MBD4O95243 RN7SL604P-201ENST00000492589 296 ntBASIC4.98□□□□□ -1.61
MBD4O95243 SUMO2P5-201ENST00000506790 245 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.98□□□□□ -1.61
MBD4O95243 AC021146.3-201ENST00000511911 260 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 AC010376.1-201ENST00000522101 334 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.98□□□□□ -1.61
MBD4O95243 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.98□□□□□ -1.61
MBD4O95243 YWHAZP1-201ENST00000556286 722 ntBASIC4.98□□□□□ -1.61
MBD4O95243 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.98□□□□□ -1.61
MBD4O95243 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.98□□□□□ -1.61
MBD4O95243 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.98□□□□□ -1.61
MBD4O95243 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AP001542.2-201ENST00000593141 364 ntBASIC4.98□□□□□ -1.61
MBD4O95243 AC105074.1-201ENST00000623380 3095 ntBASIC4.98□□□□□ -1.61
MBD4O95243 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MBD4O95243 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MBD4O95243 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MBD4O95243 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MBD4O95243 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.97□□□□□ -1.61
MBD4O95243 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
MBD4O95243 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
MBD4O95243 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 OR11H4-201ENST00000315409 1082 ntBASIC4.97□□□□□ -1.61
MBD4O95243 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.97□□□□□ -1.61
MBD4O95243 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.97□□□□□ -1.61
MBD4O95243 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.97□□□□□ -1.61
MBD4O95243 AL354692.1-201ENST00000423044 315 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC006011.1-201ENST00000442758 349 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.97□□□□□ -1.61
MBD4O95243 AC244505.3-201ENST00000454598 187 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.97□□□□□ -1.61
MBD4O95243 KRT19P6-201ENST00000510983 209 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC008837.1-201ENST00000511513 412 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.97□□□□□ -1.61
MBD4O95243 AC019227.1-201ENST00000526902 510 ntBASIC4.97□□□□□ -1.61
MBD4O95243 PTP4A1P6-201ENST00000531034 478 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC124068.1-201ENST00000563131 678 ntBASIC4.97□□□□□ -1.61
MBD4O95243 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.97□□□□□ -1.61
MBD4O95243 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 RPAP2P1-201ENST00000603626 1168 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC092953.2-201ENST00000608000 699 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AC064801.1-201ENST00000612025 407 ntBASIC4.97□□□□□ -1.61
MBD4O95243 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.97□□□□□ -1.61
MBD4O95243 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MBD4O95243 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
MBD4O95243 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.97□□□□□ -1.61
MBD4O95243 ZNF33CP-201ENST00000432492 2030 ntBASIC4.97□□□□□ -1.61
MBD4O95243 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MBD4O95243 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
MBD4O95243 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MBD4O95243 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
MBD4O95243 IL6STP1-201ENST00000346911 1020 ntBASIC4.96□□□□□ -1.62
MBD4O95243 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
MBD4O95243 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
MBD4O95243 MCTS2P-201ENST00000394552 546 ntBASIC4.96□□□□□ -1.62
MBD4O95243 MIR1193-201ENST00000408109 78 ntBASIC4.96□□□□□ -1.62
MBD4O95243 RNU2-21P-201ENST00000410368 188 ntBASIC4.96□□□□□ -1.62
MBD4O95243 AC108032.1-201ENST00000416706 207 ntBASIC4.96□□□□□ -1.62
MBD4O95243 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 TCEA1P2-201ENST00000420496 906 ntBASIC4.96□□□□□ -1.62
MBD4O95243 USP9YP21-201ENST00000420603 432 ntBASIC4.96□□□□□ -1.62
MBD4O95243 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.96□□□□□ -1.62
MBD4O95243 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 RAB11AP1-201ENST00000442978 646 ntBASIC4.96□□□□□ -1.62
MBD4O95243 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 RNU6-202P-201ENST00000515998 96 ntBASIC4.96□□□□□ -1.62
MBD4O95243 RNU6-1028P-201ENST00000517164 93 ntBASIC4.96□□□□□ -1.62
MBD4O95243 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.96□□□□□ -1.62
MBD4O95243 AC063950.1-201ENST00000552036 308 ntBASIC4.96□□□□□ -1.62
MBD4O95243 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.96□□□□□ -1.62
MBD4O95243 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.96□□□□□ -1.62
MBD4O95243 AL158050.2-201ENST00000605336 568 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms