Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 VDAC1P6-201ENST00000430062 855 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 MTND4P6-201ENST00000438297 472 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 TRBV26-201ENST00000456572 344 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AP000942.1-201ENST00000463969 747 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 NCOR1P1-202ENST00000486162 291 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 RPL7P38-201ENST00000488396 739 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF3O43395 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 RNA5SP464-201ENST00000516251 108 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 MIR4504-201ENST00000577413 92 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC112220.3-201ENST00000605502 502 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC018638.7-201ENST00000605836 1114 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC116651.1-201ENST00000609724 556 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC005962.2-201ENST00000611427 652 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AL603755.1-201ENST00000619504 163 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 RNU6-156P-201ENST00000621869 107 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC116618.1-201ENST00000634617 774 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRPF3O43395 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.34□□□□□ -1.56
PRPF3O43395 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
PRPF3O43395 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
PRPF3O43395 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
PRPF3O43395 SGO1P2-201ENST00000429458 1589 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC108751.5-201ENST00000492880 1336 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 RN7SKP115-201ENST00000363177 317 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PRPF3O43395 SNORA70F-201ENST00000384142 135 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 RNA5SP397-201ENST00000391323 118 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 MIR921-201ENST00000401133 56 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 ZNF603P-201ENST00000405613 487 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 RNU6-757P-201ENST00000410334 100 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 RPL31P2-201ENST00000413849 377 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.33□□□□□ -1.56
PRPF3O43395 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 Z74021.1-201ENST00000423610 407 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC008065.1-201ENST00000428525 348 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 YWHAZP8-201ENST00000436935 731 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AL772161.1-201ENST00000439130 476 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 PTMAP3-201ENST00000447474 330 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 CEACAMP6-201ENST00000452007 574 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 snoU13.7-201ENST00000459220 104 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.33□□□□□ -1.56
PRPF3O43395 UBE2NP1-201ENST00000545592 458 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 HNRNPCP4-201ENST00000571636 900 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 VIS1.1-201ENST00000610517 203 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AL161616.1-201ENST00000611867 286 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC092650.2-201ENST00000619984 902 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PRPF3O43395 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PRPF3O43395 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF3O43395 AC117529.2-201ENST00000512159 2068 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF3O43395 ZNF33CP-201ENST00000432492 2030 ntBASIC5.33□□□□□ -1.56
PRPF3O43395 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF3O43395 ELL2P4-201ENST00000446870 1376 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 BTBD10P1-201ENST00000549824 1352 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF3O43395 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PRPF3O43395 AC079741.1-201ENST00000321498 212 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 SSXP10-201ENST00000402595 565 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms