Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX39AO00148 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX39AO00148 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX39AO00148 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX39AO00148 AC107982.3-201ENST00000584957 985 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 AC012603.1-201ENST00000606424 528 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 AP000255.1-201ENST00000610276 676 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 AC107308.1-201ENST00000615897 301 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 AC018926.3-201ENST00000618841 406 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 AC073569.3-201ENST00000619055 682 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX39AO00148 AC017104.5-201ENST00000637647 639 ntBASIC4.43□□□□□ -1.7
DDX39AO00148 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX39AO00148 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX39AO00148 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX39AO00148 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX39AO00148 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDX39AO00148 NSRP1P1-201ENST00000444067 1693 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX39AO00148 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX39AO00148 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
DDX39AO00148 SNORA51.12-201ENST00000384448 134 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 DNAJC19P6-201ENST00000401853 280 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 ATF1P1-201ENST00000406040 927 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 RN7SKP27-201ENST00000410684 333 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 HMGB3P5-201ENST00000428894 612 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 MTCO1P54-201ENST00000430139 712 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 PPIAP3-201ENST00000450588 505 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 SNORA84-201ENST00000459229 133 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AC126121.1-201ENST00000482313 553 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
DDX39AO00148 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX39AO00148 COL6A4P2-205ENST00000509855 506 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 MTCO1P49-201ENST00000523429 802 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX39AO00148 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 ATP5F1P7-201ENST00000567330 760 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX39AO00148 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX39AO00148 AC090912.3-201ENST00000609775 533 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AL163051.2-201ENST00000618976 735 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AP006248.3-201ENST00000623580 594 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AL590396.2-201ENST00000636511 1041 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 AL596275.2-206ENST00000641957 626 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX39AO00148 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX39AO00148 OR11H5P-202ENST00000641612 1325 ntBASIC4.42□□□□□ -1.7
DDX39AO00148 ASNSP1-204ENST00000641977 1664 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 MTCO1P14-201ENST00000441695 1559 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
DDX39AO00148 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX39AO00148 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX39AO00148 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX39AO00148 AL512646.1-201ENST00000269395 1077 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 RNU6-1339P-201ENST00000363574 91 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 RNA5SP97-201ENST00000365006 84 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 MIR513A2-201ENST00000385249 127 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 SNORA3C-201ENST00000408792 125 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX39AO00148 RPS15AP40-201ENST00000419621 391 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX39AO00148 AL121882.1-201ENST00000422893 417 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX39AO00148 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX39AO00148 RPS3AP6-201ENST00000484430 795 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AL139099.1-201ENST00000497398 403 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 PPM1AP1-201ENST00000502740 1135 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX39AO00148 AC104108.1-201ENST00000509930 412 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 RNU6-1102P-201ENST00000516149 96 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC087369.1-201ENST00000520775 996 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX39AO00148 AC087272.1-201ENST00000523624 533 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
DDX39AO00148 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX39AO00148 SERPINE4P-201ENST00000554978 281 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 GNRHR2P1-201ENST00000555315 631 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX39AO00148 AC104229.1-201ENST00000561364 255 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 RMST_10.1-201ENST00000616309 154 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 AP003400.6-201ENST00000624698 740 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 NMD3P1-201ENST00000439704 1488 ntBASIC4.41□□□□□ -1.7
DDX39AO00148 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX39AO00148 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX39AO00148 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX39AO00148 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.4□□□□□ -1.7
DDX39AO00148 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.4□□□□□ -1.7
DDX39AO00148 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
DDX39AO00148 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
DDX39AO00148 RNU1-108P-201ENST00000362556 161 ntBASIC4.4□□□□□ -1.71
DDX39AO00148 SNORA70E-201ENST00000384492 135 ntBASIC4.4□□□□□ -1.71
DDX39AO00148 RNU2-21P-201ENST00000410368 188 ntBASIC4.4□□□□□ -1.71
DDX39AO00148 RN7SKP159-201ENST00000410657 292 ntBASIC4.4□□□□□ -1.71
DDX39AO00148 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms