Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC188H7C350 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 RNU6-444P-201ENST00000383988 108 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 MCTS2P-201ENST00000394552 546 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 MTCO2P31-201ENST00000402702 684 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 GSTA8P-201ENST00000404253 637 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 BTF3P8-201ENST00000414577 526 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC188H7C350 KCTD9P3-201ENST00000434597 1169 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC188H7C350 AC006466.1-201ENST00000438721 289 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 PHBP16-201ENST00000446318 950 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 RPS15AP1-201ENST00000457423 391 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 RN7SL98P-201ENST00000462271 300 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC091860.1-201ENST00000505723 432 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 BTF3L4P4-201ENST00000506381 449 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC093824.1-201ENST00000508796 343 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC188H7C350 MTND1P6-201ENST00000523621 946 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC188H7C350 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC188H7C350 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC188H7C350 RPL23AP87-202ENST00000573039 466 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC012417.1-201ENST00000582307 1039 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC188H7C350 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC188H7C350 AC113194.1-201ENST00000606037 500 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC097504.2-201ENST00000608088 454 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC090246.1-201ENST00000616499 426 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 AC068620.4-201ENST00000636730 1182 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC188H7C350 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC188H7C350 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC188H7C350 MTND4P8-201ENST00000514997 1362 ntBASIC4.27□□□□□ -1.73
CCDC188H7C350 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 AL627171.1-201ENST00000618845 1308 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC188H7C350 Y_RNA.578-201ENST00000390903 88 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AL450992.3-201ENST00000413192 568 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 AL513175.1-201ENST00000431492 780 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC188H7C350 PPIAP17-201ENST00000438507 471 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC188H7C350 HMGB1P38-201ENST00000490557 577 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 RN7SL691P-201ENST00000494487 301 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC026414.1-201ENST00000504046 698 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 NDUFB4P12-201ENST00000513465 390 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC188H7C350 NARSP2-201ENST00000518524 679 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 SOD1P3-201ENST00000518682 454 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC104417.1-201ENST00000523974 751 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC105233.3-201ENST00000531125 744 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 EIF5A2P1-201ENST00000564027 460 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 MIR4270-201ENST00000581799 70 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC188H7C350 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 AP002802.2-201ENST00000605877 235 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC188H7C350 UBE3AP2-201ENST00000429033 2259 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 SGO1P1-201ENST00000603525 1447 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC188H7C350 AC138393.1-206ENST00000540997 1886 ntBASIC4.26□□□□□ -1.73
CCDC188H7C350 NCAPGP1-201ENST00000505112 1814 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC188H7C350 OR11H4-201ENST00000315409 1082 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC188H7C350 RNU6-984P-201ENST00000363236 109 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 MIR124-3-201ENST00000384866 87 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 MIR16-1-201ENST00000385271 89 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 SFR1P1-201ENST00000403720 688 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 MIR1251-201ENST00000408552 70 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 OR51A3P-201ENST00000413596 924 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 AL354692.1-201ENST00000423044 315 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 OR51AB1P-201ENST00000429046 620 ntBASIC4.25□□□□□ -1.73
CCDC188H7C350 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms