Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 U3.35-201ENST00000408405 208 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RNU2-65P-201ENST00000410162 185 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RNA5SP113-201ENST00000410486 84 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 NPM1P40-201ENST00000412758 733 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL590139.1-201ENST00000416267 400 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 OR5BE1P-201ENST00000425977 939 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RPS24P1-201ENST00000438550 371 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC004865.1-201ENST00000442276 1003 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SLC25A18P1-201ENST00000449385 454 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC108463.1-201ENST00000450258 347 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC022431.1-201ENST00000450941 438 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 ZNF114P1-201ENST00000453500 292 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RPL23AP56-201ENST00000460778 453 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC006463.2-201ENST00000473326 348 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC005912.1-201ENST00000495392 255 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 RNU6-709P-201ENST00000517257 104 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AF279873.1-201ENST00000523393 313 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC079075.1-201ENST00000559543 878 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC010424.2-201ENST00000607594 443 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC092354.2-201ENST00000607786 514 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC092650.2-201ENST00000619984 902 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC012414.7-202ENST00000622705 1090 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AL049536.1-201ENST00000625043 744 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC026634.1-201ENST00000634369 198 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 OR5BE1P-202ENST00000641168 1176 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SALL4P2-201ENST00000423288 2910 ntBASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPDC1A2A3K4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL034370.1-201ENST00000397254 1590 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC093849.1-201ENST00000563631 2209 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 MIR192-201ENST00000384915 110 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 USP9YP33-201ENST00000412220 421 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AF274854.1-201ENST00000413236 615 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL136133.1-201ENST00000413694 376 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL807761.1-201ENST00000417622 171 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC062016.2-201ENST00000420950 676 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 USP9YP35-201ENST00000435696 412 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 SEPT7P3-201ENST00000455017 621 ntBASIC5.65□□□□□ -1.5
PTPDC1A2A3K4 AC020890.1-201ENST00000491837 504 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms