Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPS27AP17-201ENST00000463344 455 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RN7SL329P-201ENST00000467740 299 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RPS3AP43-201ENST00000479743 781 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC093270.2-201ENST00000486157 792 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 NDUFA5P12-201ENST00000503796 343 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 HNRNPKP5-201ENST00000515300 253 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-232P-201ENST00000517144 64 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AP001781.1-201ENST00000530977 207 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 MTND6P33-201ENST00000571794 183 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC084782.3-201ENST00000612282 578 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL354976.1-201ENST00000613843 387 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC123768.4-201ENST00000616244 701 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL596275.2-204ENST00000641628 552 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 AL596275.2-206ENST00000641957 626 ntBASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 RNU2-42P-201ENST00000410697 113 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 RN7SKP216-201ENST00000411050 312 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 RPS20P14-201ENST00000412545 360 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 BOLA3P4-201ENST00000418151 400 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC009237.2-201ENST00000421358 284 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC233981.1-201ENST00000423224 461 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC009965.2-201ENST00000425328 970 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 NF1P3-201ENST00000457709 450 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC010307.1-201ENST00000467206 836 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC111000.2-201ENST00000507775 550 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 MTCO3P28-201ENST00000513351 515 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC134698.5-201ENST00000519444 336 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AP001189.2-201ENST00000527320 189 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC093519.1-201ENST00000566109 298 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC016180.1-201ENST00000567945 403 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC022069.1-201ENST00000582910 658 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC017100.2-201ENST00000584628 355 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 VN1R90P-201ENST00000595717 726 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC103881.1-201ENST00000603476 538 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC133552.5-201ENST00000604266 540 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC072039.2-201ENST00000608883 439 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC116447.1-201ENST00000613153 453 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC069209.1-201ENST00000619282 651 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC026634.1-201ENST00000634369 198 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 OR51H2P-202ENST00000641424 3046 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AC120338.1-201ENST00000625074 1541 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 AP000756.2-201ENST00000624168 2567 ntBASIC4.51□□□□□ -1.69
TCRBV7S3A2A0A539 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms