Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AC008759.1-201ENST00000589783 983 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AL451086.1-201ENST00000605596 223 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AL392048.1-201ENST00000613946 534 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AL359715.5-201ENST00000623431 443 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AC008785.1-201ENST00000624475 456 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 MTCO1P18-201ENST00000455518 1419 ntBASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1G3Q9Y6M4 RLIMP1-201ENST00000339626 1680 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL161912.2-201ENST00000565707 3007 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 MIR1179-201ENST00000408703 91 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 MIR1911-201ENST00000410783 80 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC093698.1-201ENST00000423843 571 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 OR8F1P-201ENST00000425243 930 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 Z80107.1-201ENST00000436830 412 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 PPIAP17-201ENST00000438507 471 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL354710.1-201ENST00000453641 246 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC008280.2-201ENST00000455473 307 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 GTF2IP12-201ENST00000456547 356 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL133477.1-201ENST00000457472 514 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC092045.1-201ENST00000495716 1231 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC006499.6-201ENST00000511169 607 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 MTND4LP31-201ENST00000514859 294 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC010376.1-201ENST00000522101 334 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 RFPL1S-203ENST00000539579 330 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 MTND1P8-201ENST00000571424 950 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 BNIP3P33-201ENST00000598912 569 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AL022067.1-201ENST00000602426 454 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC245389.1-201ENST00000605141 529 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC007342.8-201ENST00000623278 678 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC027287.1-201ENST00000553115 1453 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 AC007390.2-201ENST00000606229 3803 ntBASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1G3Q9Y6M4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 OR11H4-201ENST00000315409 1082 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC067945.1-201ENST00000342609 618 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 MIR23B-201ENST00000384832 97 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 HMGB3P18-201ENST00000406327 590 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 RN7SKP159-201ENST00000410657 292 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 RNA5SP498-201ENST00000411342 120 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC013404.1-201ENST00000413068 249 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 RWDD4P2-201ENST00000426392 563 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 USP12PY-201ENST00000427677 1064 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 HMGB3P5-201ENST00000428894 612 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.09□□□□□ -1.75
CSNK1G3Q9Y6M4 SNORA84-201ENST00000459229 133 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms