Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AL365222.1-201ENST00000614661 98 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 pRNA.9-201ENST00000618609 89 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 EIF2AP4-201ENST00000424793 1781 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 OR2AH1P-202ENST00000641232 2744 ntBASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VPS9D1Q9Y2B5 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF33CP-201ENST00000432492 2030 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-1020P-201ENST00000363684 107 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 FAUP2-201ENST00000394301 401 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-394P-201ENST00000410735 107 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RNU4-78P-201ENST00000410940 126 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RPSAP1-201ENST00000421328 880 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC087650.1-201ENST00000431445 468 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RPL37P1-201ENST00000432310 284 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AL604028.2-201ENST00000437848 788 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC021382.1-201ENST00000483523 359 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RPS24P16-201ENST00000497294 392 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 RAB9BP1-201ENST00000519581 626 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AL132640.2-202ENST00000559732 614 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 MIR4685-201ENST00000578185 69 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AC009570.1-201ENST00000609599 745 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 U6.106-201ENST00000636360 105 ntBASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VPS9D1Q9Y2B5 TUBBP10-201ENST00000427668 1301 ntBASIC7.02□□□□□ -1.28
VPS9D1Q9Y2B5 AC006484.1-201ENST00000435086 1884 ntBASIC7.02□□□□□ -1.28
VPS9D1Q9Y2B5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
VPS9D1Q9Y2B5 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
VPS9D1Q9Y2B5 AC007998.4-201ENST00000612496 2533 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.43-201ENST00000362670 111 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 RNU1-85P-201ENST00000364127 164 ntBASIC7.02□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.234-201ENST00000364409 97 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms