Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC233266.2-201ENST00000567067 528 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MIR4512-201ENST00000583257 77 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 ZYXP1-201ENST00000617638 118 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC007342.8-201ENST00000623278 678 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 AC100871.1-201ENST00000507871 1456 ntBASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TRAPPC4Q9Y296 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ASNSP1-204ENST00000641977 1664 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL136964.1-201ENST00000622038 2990 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC090229.1-201ENST00000590983 1609 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RN7SKP227-201ENST00000364445 330 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RNU6-185P-201ENST00000384421 107 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL356057.1-202ENST00000402263 756 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL590704.1-201ENST00000402856 794 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 PPIAP31-201ENST00000405422 495 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RN7SKP177-201ENST00000410567 355 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ARL2BPP3-201ENST00000421226 480 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC004975.1-201ENST00000428733 208 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL117339.2-201ENST00000430475 180 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 TBCAP1-201ENST00000436520 327 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RPL21P89-201ENST00000444021 467 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC006326.1-201ENST00000445465 787 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 NDUFA5P2-201ENST00000519723 344 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC004923.2-201ENST00000529649 369 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL139174.1-201ENST00000531489 886 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 MIR4458-201ENST00000578872 75 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 MIR4697-201ENST00000582977 78 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AL450270.1-201ENST00000606160 391 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 AC090617.9-201ENST00000623751 147 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.53□□□□□ -1.84
TRAPPC4Q9Y296 ZNF90P1-201ENST00000480493 1951 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 RAD1P1-201ENST00000231383 813 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL391417.1-201ENST00000404100 426 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 RPL31P52-201ENST00000407532 367 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 Z97055.1-201ENST00000419730 712 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 OR8F1P-201ENST00000425243 930 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 RNU7-27P-201ENST00000459281 62 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 RPL21P71-201ENST00000465598 459 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC007537.2-201ENST00000472093 511 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC010683.1-201ENST00000473673 378 ntBASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.52□□□□□ -1.85
TRAPPC4Q9Y296 FTH1P21-201ENST00000512179 511 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms