Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MACF1Q9UPN3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL513043.1-201ENST00000439124 535 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC021678.1-201ENST00000505195 936 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 Z82209.1-201ENST00000422141 2135 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC092821.2-201ENST00000545710 2042 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 Y_RNA.30-201ENST00000362572 97 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 U3.12-201ENST00000364498 214 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RPS26P38-201ENST00000414476 348 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC063979.1-201ENST00000415539 377 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AP000926.3-201ENST00000497201 299 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC026790.2-201ENST00000606282 430 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC006378.2-201ENST00000623178 2476 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 USP9YP6-201ENST00000413550 854 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL353678.1-201ENST00000422735 741 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 USP9YP34-201ENST00000453983 808 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RPL23AP53-201ENST00000521854 457 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL035413.2-201ENST00000604801 525 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RNU6-115P-201ENST00000364310 107 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RPS29P26-201ENST00000477483 171 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC099489.2-201ENST00000574976 260 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC026634.1-201ENST00000634369 198 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 DBF4P1-201ENST00000412976 1892 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC006504.1-201ENST00000562493 3666 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 HMGN1P24-201ENST00000412282 298 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC063976.3-201ENST00000426849 329 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RPS15AP29-201ENST00000445539 400 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL356274.2-201ENST00000624379 3752 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC018555.1-201ENST00000567548 1980 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 NUP58P1-201ENST00000502546 1738 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RNU6-14P-201ENST00000384630 106 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 GLS-204ENST00000409428 816 ntTSL 2 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 EEF1A1P41-201ENST00000414667 207 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 SETD6P1-201ENST00000444575 317 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 MOB1AP2-201ENST00000446060 614 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AC079171.1-201ENST00000568788 914 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 AL022311.1-201ENST00000623726 19416 ntBASIC1.43□□□□□ -2.18
MACF1Q9UPN3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MACF1Q9UPN3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
MACF1Q9UPN3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC1.42□□□□□ -2.18
MACF1Q9UPN3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms