Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.88□□□□□ -1.31
LIMD1Q9UGP4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.88□□□□□ -1.31
LIMD1Q9UGP4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIMD1Q9UGP4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC010329.2-201ENST00000595195 2737 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MAPK10-323ENST00000641493 3207 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 SNORA70.3-201ENST00000365075 132 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 RNU6-1040P-201ENST00000383974 107 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MT-TR-201ENST00000387439 65 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL136372.1-201ENST00000403060 228 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 RNU4-46P-201ENST00000410818 138 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 RPL7P10-201ENST00000417407 739 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL929472.1-201ENST00000417484 429 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ATG3P1-201ENST00000419507 911 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 RPS7P3-201ENST00000443360 580 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MTND1P17-201ENST00000448961 204 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL162395.1-201ENST00000457882 422 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AP002453.1-201ENST00000492327 668 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 HMGN1P9-201ENST00000515212 298 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 EIF4A2P5-201ENST00000529914 499 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC010653.1-201ENST00000571108 881 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC005191.1-201ENST00000603950 358 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC005014.2-201ENST00000607795 599 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC012409.4-201ENST00000612923 249 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MIR6886-201ENST00000619864 61 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AL353662.3-201ENST00000625131 237 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC073488.9-201ENST00000631601 754 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC008013.2-202ENST00000637965 364 ntBASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LIMD1Q9UGP4 AC091046.3-201ENST00000631455 1574 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 GNL2P1-201ENST00000451274 2190 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 AC005332.9-201ENST00000620266 2921 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 Y_RNA.188-201ENST00000363952 111 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 RNU1-24P-201ENST00000364285 165 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 RNA5SP510-201ENST00000364697 99 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 SNORD82-201ENST00000365530 70 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 RN7SKP81-201ENST00000365603 331 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 RNU6-505P-201ENST00000384427 107 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 MIR199B-201ENST00000384849 110 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 RNU6-387P-201ENST00000411331 105 ntBASIC6.86□□□□□ -1.31
LIMD1Q9UGP4 POLHP1-201ENST00000411806 470 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms