Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 PNPT1P2-201ENST00000456768 2050 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 OR4A15-201ENST00000314706 1035 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 ZNF602P-201ENST00000405929 924 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AL603766.1-201ENST00000407763 664 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 VTA1P1-201ENST00000414044 866 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 MTCO1P54-201ENST00000430139 712 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AL035246.1-201ENST00000433554 1255 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC074367.1-201ENST00000438685 1125 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC044797.1-201ENST00000445744 679 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AL451050.1-201ENST00000450126 415 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC010683.1-201ENST00000473673 378 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AP002812.1-201ENST00000495378 474 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC018797.3-201ENST00000513388 1241 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 IGKV2-36-201ENST00000519999 223 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC069240.1-201ENST00000548774 375 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC084757.1-201ENST00000559987 490 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 MTND4LP24-201ENST00000572277 291 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 MIR3158-1-201ENST00000583596 81 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC115085.1-201ENST00000588924 229 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC079880.2-201ENST00000603790 1213 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC006133.1-201ENST00000617106 264 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AP006248.3-201ENST00000623580 594 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AC083865.1-201ENST00000636634 831 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 AL353743.4-201ENST00000422653 1547 ntBASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLCF1Q9UBD9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 RNU1-85P-201ENST00000364127 164 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL359837.1-201ENST00000381357 287 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 U1.1-201ENST00000384101 164 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 RNU6-98P-201ENST00000384173 107 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 RN7SKP156-201ENST00000410308 342 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 PNRC2P1-201ENST00000423940 420 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC018644.1-201ENST00000429934 551 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 HMGB1P37-201ENST00000439613 609 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 RANP8-201ENST00000444720 713 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 TPTE2P6-202ENST00000445572 1007 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL133547.1-201ENST00000448546 220 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL500522.2-201ENST00000448562 343 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 NANOGP10-201ENST00000453325 895 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 RNU6-1102P-201ENST00000516149 96 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 SNORA67.7-201ENST00000516664 135 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 OR5AK3P-201ENST00000527486 1297 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms