Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAPAQ9P0L0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL121657.1-201ENST00000327215 531 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 RNU6-213P-201ENST00000384051 104 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 ZNF602P-201ENST00000405929 924 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 LINC01881-201ENST00000416103 412 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL390879.2-203ENST00000426943 1121 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL160175.1-201ENST00000428124 247 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC245517.2-201ENST00000442890 346 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 RAD1P2-201ENST00000446414 663 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AP002345.1-201ENST00000456493 928 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC010618.1-201ENST00000469924 477 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 RPL7P19-201ENST00000469948 618 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC110792.2-201ENST00000510278 224 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 HMGB1P47-201ENST00000511281 589 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 FTH1P21-201ENST00000512179 511 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 Vault.1-201ENST00000516474 102 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC104997.1-201ENST00000519761 717 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 C1GALT1P3-201ENST00000522049 819 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 OR7E13P-201ENST00000526052 910 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL121766.1-201ENST00000547436 487 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL049870.4-201ENST00000555741 486 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 MIR4284-201ENST00000578924 81 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AP000919.1-202ENST00000581139 1264 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL445423.1-201ENST00000609941 536 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 AL732372.2-225ENST00000642124 456 ntBASIC3.48□□□□□ -1.85
VAPAQ9P0L0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VAPAQ9P0L0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL606490.8-201ENST00000441624 319 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 MTCYBP21-201ENST00000443300 1113 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 MRPS31P2-201ENST00000451581 518 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 RPS7P7-201ENST00000463499 571 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC107398.1-201ENST00000486904 505 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 FCF1P3-201ENST00000496394 590 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 SNORA70.17-201ENST00000516449 133 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC074029.2-201ENST00000551045 634 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC023161.2-201ENST00000551218 780 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 ZNF92P3-201ENST00000596594 954 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AP004607.9-201ENST00000618202 316 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms