Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL157831.1-201ENST00000426134 473 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 FTH1P16-201ENST00000435241 552 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC092685.1-201ENST00000447960 1243 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 OR51B8P-201ENST00000449892 769 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RPL5P32-201ENST00000454085 879 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RN7SL738P-201ENST00000470264 297 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RN7SL826P-201ENST00000479724 288 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 NDUFA5P12-201ENST00000503796 343 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC004069.2-201ENST00000505438 1114 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 OR8G5-201ENST00000524943 1041 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC009101.1-201ENST00000568135 242 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC099489.2-201ENST00000574976 260 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 MIR4644-201ENST00000579929 84 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC113403.1-201ENST00000604910 193 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC005084.1-201ENST00000605160 304 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC009974.1-201ENST00000608881 455 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 MIR6748-201ENST00000610433 71 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 MIR7155-201ENST00000615925 56 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL591424.2-201ENST00000617023 128 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AC097520.1-201ENST00000624435 385 ntBASIC3.94□□□□□ -1.78
NDE1Q9NXR1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NDE1Q9NXR1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 METTL21EP-201ENST00000298105 713 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RNA5SP507-201ENST00000363603 121 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 USP9YP21-201ENST00000420603 432 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 UQCRBP1-201ENST00000421129 336 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 NANOGP5-201ENST00000424456 877 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 NPM1P34-201ENST00000428821 893 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RPL7P29-201ENST00000437151 728 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RPS26P30-201ENST00000443431 335 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RPL31P44-201ENST00000447680 377 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL031313.1-201ENST00000448435 256 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 HIGD1AP8-201ENST00000453927 274 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 SNRPGP5-201ENST00000456003 220 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC004815.1-201ENST00000484185 331 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC093720.1-201ENST00000505681 714 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC118282.1-201ENST00000506408 765 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC092593.2-201ENST00000513866 913 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 RNU7-143P-201ENST00000516781 65 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 OR10V3P-201ENST00000525712 725 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL132857.1-201ENST00000555180 708 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC012417.1-201ENST00000582307 1039 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AP002906.1-201ENST00000603405 233 ntBASIC3.93□□□□□ -1.78
NDE1Q9NXR1 AL451044.1-201ENST00000604867 238 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms