Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNFT1P2-201ENST00000443064 757 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 VN1R34P-201ENST00000447387 883 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC092685.1-201ENST00000447960 1243 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC104306.1-201ENST00000449702 371 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC087385.1-201ENST00000475062 312 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 BNIP3P41-201ENST00000503774 571 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 SNX5P1-201ENST00000505757 1041 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 OR5AK3P-201ENST00000527486 1297 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 OSBPL9P3-201ENST00000534523 595 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC120057.2-201ENST00000571520 271 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 MIR5685-201ENST00000579080 79 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC115085.1-201ENST00000588924 229 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 U6.48-201ENST00000618523 106 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 MIR4727-201ENST00000622232 55 ntBASIC4.23□□□□□ -1.73
HPS4Q9NQG7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HPS4Q9NQG7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 MTND4P31-201ENST00000425607 1343 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RNU6-1005P-201ENST00000384519 107 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 VTA1P1-201ENST00000414044 866 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RAC1P3-201ENST00000416129 580 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 PNRC2P1-201ENST00000423940 420 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPL7P29-201ENST00000437151 728 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPS4XP4-201ENST00000443195 763 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPL7P1-201ENST00000468161 747 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPL7P9-201ENST00000468715 747 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 GAPDHP36-201ENST00000480688 918 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 RPS4XP15-201ENST00000489210 795 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC110792.1-201ENST00000491826 472 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC108145.1-201ENST00000503770 153 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC124068.1-201ENST00000563131 678 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 MTND4LP24-201ENST00000572277 291 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AP001180.3-201ENST00000582221 145 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC090912.3-201ENST00000609775 533 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 AC083865.1-201ENST00000636634 831 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 MTND5P11-201ENST00000511037 1812 ntBASIC4.22□□□□□ -1.73
HPS4Q9NQG7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS4Q9NQG7 Z82217.1-201ENST00000625157 8149 ntBASIC4.21□□□□□ -1.73
HPS4Q9NQG7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HPS4Q9NQG7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.21□□□□□ -1.73
HPS4Q9NQG7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 RNU6-792P-201ENST00000363490 107 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 RNU6-796P-201ENST00000391086 107 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 RPL7P53-201ENST00000421245 739 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 AC018644.1-201ENST00000429934 551 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS4Q9NQG7 TPTE2P6-202ENST00000445572 1007 ntBASIC4.21□□□□□ -1.74
HPS4Q9NQG7 AL358232.1-201ENST00000448030 501 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms