Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNB1IP1Q9NPC3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC017083.1-201ENST00000428093 483 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC006011.1-201ENST00000442758 349 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC146507.1-201ENST00000468335 354 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC104689.1-201ENST00000473356 768 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 RPS27AP13-201ENST00000498403 237 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC008494.2-201ENST00000514544 370 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AP004242.1-201ENST00000533701 349 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC090751.1-201ENST00000566966 267 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC025627.2-201ENST00000576220 160 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 MIR3939-201ENST00000582614 106 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 MIR5684-201ENST00000585074 65 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 MIR3138-201ENST00000585238 82 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AL445423.1-201ENST00000609941 536 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 AC016717.3-201ENST00000624730 554 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 DDX6P1-205ENST00000441966 1436 ntBASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNB1IP1Q9NPC3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL589655.1-201ENST00000405398 482 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL358472.1-201ENST00000431295 329 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 IGBP1P5-201ENST00000507524 1000 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 KRT19P6-201ENST00000510983 209 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC005351.1-201ENST00000511152 786 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU4-60P-201ENST00000517239 135 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 MRPL49P2-201ENST00000521066 465 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AP003730.1-201ENST00000524605 285 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC025260.1-201ENST00000548858 430 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC006338.2-201ENST00000616864 791 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 AL133383.2-201ENST00000622958 2336 ntBASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms