Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC008758.3-201ENST00000507003 1829 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC008549.2-201ENST00000333482 706 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AL590240.1-201ENST00000334118 313 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AL138880.1-201ENST00000405824 642 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 RN7SKP106-201ENST00000410832 272 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 USP9YP33-201ENST00000412220 421 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 RPL12P9-201ENST00000412942 488 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC009237.2-201ENST00000421358 284 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AL136231.1-201ENST00000429407 730 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC010153.1-201ENST00000432862 727 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 USP9YP35-201ENST00000435696 412 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 MTCO2P16-201ENST00000436962 677 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 MTND1P30-201ENST00000441241 901 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 SLC31A1P1-201ENST00000451221 567 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 RPL26P28-201ENST00000451325 435 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 RPS15AP1-201ENST00000457423 391 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 SETP11-201ENST00000473027 690 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC093267.1-201ENST00000489176 961 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 MTND3P5-201ENST00000512798 333 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 HIGD1AP10-201ENST00000527837 282 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC074029.1-201ENST00000552531 1044 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC022726.1-201ENST00000587475 207 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 WISP1-OT1-201ENST00000602893 642 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 RNU6-88P-201ENST00000606801 100 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 MIR7844-201ENST00000616161 122 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AC107027.3-201ENST00000565095 3473 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 AL079343.1-201ENST00000572358 1771 ntBASIC5.49□□□□□ -1.53
VTA1Q9NP79 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.49□□□□□ -1.53
VTA1Q9NP79 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTA1Q9NP79 OR5BR1P-201ENST00000524992 1330 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC126755.2-208ENST00000327792 462 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC138969.1-213ENST00000331436 462 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTA1Q9NP79 SNORA70F-201ENST00000384142 135 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 MTCYBP38-201ENST00000417160 1123 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPS27AP7-201ENST00000422792 455 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPL18P10-201ENST00000425606 538 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 IPMKP1-201ENST00000425988 855 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL031736.2-201ENST00000426573 787 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPP40P1-201ENST00000426762 456 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 MTND4P6-201ENST00000438297 472 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPL7AP61-201ENST00000443410 636 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL360221.1-201ENST00000445989 335 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 MTCO3P16-201ENST00000454456 754 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RPL18AP17-201ENST00000455326 198 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RN7SL385P-201ENST00000468873 276 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AK3P4-201ENST00000504283 583 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 MTND4P2-201ENST00000507767 1203 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 NDUFA5P2-201ENST00000519723 344 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.48□□□□□ -1.53
VTA1Q9NP79 AC239860.2-201ENST00000525886 270 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 OR5M2P-201ENST00000529003 936 ntBASIC5.48□□□□□ -1.53
VTA1Q9NP79 OR4A12P-201ENST00000530847 918 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms