Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC026979.1-201ENST00000492525 396 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 RNU4-60P-201ENST00000517239 135 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 OR4A12P-201ENST00000530847 918 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 OR8L1P-201ENST00000534005 955 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC139103.1-201ENST00000534696 1030 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 YPEL5P3-201ENST00000547227 352 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC006270.2-201ENST00000578523 652 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC015911.5-201ENST00000587076 451 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 EIF1P6-201ENST00000600054 334 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AF230666.2-201ENST00000602328 725 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 KATNBL1P1-201ENST00000605192 748 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC015802.5-201ENST00000607478 399 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 BX323046.1-201ENST00000610145 535 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 MIR6830-201ENST00000636015 70 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
LRRC40Q9H9A6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 XPOTP1-201ENST00000443317 2398 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 EIF2S2P3-201ENST00000428356 999 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 EXTL2P1-201ENST00000446218 416 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 BX276092.4-201ENST00000452056 248 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 snoU13.7-201ENST00000459220 104 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 RPS7P7-201ENST00000463499 571 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 RPS23P7-201ENST00000466210 444 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 NDUFA5P9-201ENST00000472609 340 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC078817.1-201ENST00000492623 435 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 RPL5P23-201ENST00000496040 868 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 HPRT1P1-201ENST00000509498 657 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC093755.1-201ENST00000512950 1023 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 C1DP5-201ENST00000525775 383 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC141257.3-201ENST00000572906 215 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 MIR4644-201ENST00000579929 84 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AL591034.3-201ENST00000605511 685 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 MIR6867-201ENST00000610636 67 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC006338.2-201ENST00000616864 791 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC112484.5-201ENST00000624189 228 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 RLIMP1-201ENST00000339626 1680 ntBASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRRC40Q9H9A6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AL121657.1-201ENST00000327215 531 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 HLFP1-201ENST00000402375 499 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 PSMA2P3-201ENST00000429685 675 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 MTND4LP7-201ENST00000431728 294 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 PPIAP17-201ENST00000438507 471 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AC092809.1-201ENST00000441469 474 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 RPL29P29-201ENST00000448725 423 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms