Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS11Q9H270 AL731566.1-201ENST00000620490 1937 ntBASIC5.31□□□□□ -1.56
VPS11Q9H270 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 AL450326.2-201ENST00000421913 1962 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 snoZ40.1-201ENST00000364540 72 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 MIR181A1-201ENST00000385026 110 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 RPL21P32-201ENST00000419877 477 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AL139413.1-201ENST00000421309 217 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AF228730.4-201ENST00000421457 183 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC002069.1-201ENST00000429649 1159 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 RPL12P46-201ENST00000436610 195 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC073614.1-201ENST00000438690 650 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS11Q9H270 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 RPS27AP15-201ENST00000447672 466 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 RPL21P134-201ENST00000453468 483 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 OR9M1P-201ENST00000459641 921 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC109462.1-201ENST00000491087 368 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS11Q9H270 MTND3P22-201ENST00000510932 243 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 ARL2BPP6-201ENST00000512757 439 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS11Q9H270 RNU6-314P-201ENST00000516574 104 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 RN7SKP70-201ENST00000516655 271 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 Y_RNA.701-201ENST00000516812 110 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AF279873.1-201ENST00000523393 313 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
VPS11Q9H270 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.3□□□□□ -1.56
VPS11Q9H270 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC006504.3-201ENST00000586818 523 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC104458.1-201ENST00000608243 463 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 CR381653.2-201ENST00000624041 768 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 AC127502.3-201ENST00000636170 1206 ntBASIC5.3□□□□□ -1.56
VPS11Q9H270 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.3□□□□□ -1.56
VPS11Q9H270 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VPS11Q9H270 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VPS11Q9H270 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS11Q9H270 SMG1P4-204ENST00000523028 4131 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL672167.1-204ENST00000641875 3017 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC131971.1-201ENST00000332881 1482 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 HMGB1P5-201ENST00000255320 642 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS11Q9H270 RNU6-707P-201ENST00000364647 95 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 RN7SKP226-201ENST00000364912 300 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS11Q9H270 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VPS11Q9H270 SNORA68.2-201ENST00000391263 128 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC007394.1-201ENST00000421941 531 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AL158073.1-201ENST00000426848 1104 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 MTCO1P3-201ENST00000429327 192 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 RPL37P1-201ENST00000432310 284 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.29□□□□□ -1.56
VPS11Q9H270 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.29□□□□□ -1.56
VPS11Q9H270 VN1R10P-201ENST00000447106 875 ntBASIC5.29□□□□□ -1.56
VPS11Q9H270 RPL36AP33-201ENST00000450395 310 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms