Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RN7SL293P-201ENST00000481765 281 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 ATG10-AS1-201ENST00000504846 648 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC090819.1-201ENST00000523800 1111 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AL121576.1-201ENST00000556055 276 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AF131215.7-201ENST00000602443 707 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 BRDTP1-201ENST00000605735 677 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AP002967.1-201ENST00000624203 539 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC110792.3-201ENST00000595906 1614 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 RNA5SP424-201ENST00000390988 115 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 Z98941.1-201ENST00000407764 100 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC002075.2-201ENST00000425207 252 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 MOB1AP1-201ENST00000430903 535 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 UBE2V2P3-201ENST00000433562 437 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 BUD31P2-201ENST00000449374 300 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC099560.2-201ENST00000457554 255 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 EIF2S2P4-201ENST00000461070 984 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC026427.2-201ENST00000506228 536 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 RN7SKP209-201ENST00000516888 304 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC022695.1-201ENST00000522089 237 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 DEFB109D-201ENST00000529497 240 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC135001.1-201ENST00000544546 283 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC087888.1-201ENST00000550884 1254 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC018816.2-201ENST00000621460 353 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 MIR6715B-201ENST00000637172 77 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 AC058791.1-201ENST00000608412 3198 ntBASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPAP1Q9BWH6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC107027.3-201ENST00000565095 3473 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 RNU6-618P-201ENST00000363518 112 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 SNORD65-201ENST00000391079 73 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC240504.1-201ENST00000395709 845 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 HSPE1P8-201ENST00000406997 288 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 RNU6-564P-201ENST00000410983 104 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 SKP1P1-201ENST00000438081 489 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 SNORD105B-201ENST00000458770 79 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AL358832.1-201ENST00000497800 389 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC074250.1-201ENST00000511117 192 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 RFPL1S-203ENST00000539579 330 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC006960.3-201ENST00000561845 705 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC009101.1-201ENST00000568135 242 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 MIR3922-201ENST00000585192 84 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPAP1Q9BWH6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 MTND5P1-201ENST00000445440 1375 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC093716.1-201ENST00000435923 377 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC092641.1-201ENST00000440229 772 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 RAD1P2-201ENST00000446414 663 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 RPL21P23-201ENST00000446654 460 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 CALM1P2-201ENST00000452941 448 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC007967.1-201ENST00000455422 1159 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 snoU109.6-201ENST00000516831 118 ntBASIC4.47□□□□□ -1.69
RPAP1Q9BWH6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms