Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 CBX3P1-201ENST00000325243 554 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-707P-201ENST00000364647 95 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 TAF9BP1-201ENST00000396646 746 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 HMGB3P7-201ENST00000400214 611 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL513174.1-201ENST00000423182 629 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 COX6CP13-201ENST00000428703 226 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 OR7E125P-201ENST00000443450 846 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 RAB28P3-201ENST00000448325 597 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 RPS20P4-201ENST00000461659 355 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC013828.1-201ENST00000481845 158 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC231760.1-201ENST00000498002 260 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 WBP1LP4-201ENST00000505043 344 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC044913.1-201ENST00000557200 430 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 MIR3912-201ENST00000577566 105 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 SNORD39.2-201ENST00000579995 76 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC006504.3-201ENST00000586818 523 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC011487.3-201ENST00000593607 453 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC068790.7-201ENST00000602347 528 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL365503.1-201ENST00000605247 905 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC011374.2-201ENST00000607135 526 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC104458.1-201ENST00000608243 463 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AP000238.1-201ENST00000608759 426 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC015922.4-201ENST00000612568 690 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 MFSD8-245ENST00000641743 948 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AC099063.3-201ENST00000642066 185 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC007996.1-201ENST00000620414 2821 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 RNA5SP27-201ENST00000363839 119 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 SNORA2.3-201ENST00000383920 135 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC007066.1-201ENST00000392902 381 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 RNA5SP296-201ENST00000410523 111 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 GJA6P-201ENST00000415117 1042 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC012498.1-201ENST00000424037 437 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC233728.2-201ENST00000425348 757 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 NPM1P22-201ENST00000427761 952 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 RBMY2QP-201ENST00000429799 1147 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 MTATP6P30-201ENST00000443540 664 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 UBTFL6-201ENST00000477929 1024 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC107398.1-201ENST00000486904 505 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 RN7SL441P-201ENST00000492388 296 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 STMN1P2-201ENST00000508435 439 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC079395.1-201ENST00000510981 262 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 MTCO1P35-201ENST00000515270 228 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 RN7SKP298-201ENST00000515950 94 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC018552.1-201ENST00000562099 811 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 MTCYBP13-201ENST00000578634 1093 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms