Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 MIR7-2-201ENST00000384970 110 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 EIF4EP1-201ENST00000422311 642 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC006480.1-201ENST00000449887 378 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC098824.1-201ENST00000453565 980 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 OR6R2P-201ENST00000609216 300 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AL450338.1-201ENST00000407987 512 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 ELOCP8-201ENST00000439309 332 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 ELOCP15-201ENST00000442090 332 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC099063.2-201ENST00000446360 662 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 ARL4AP1-201ENST00000503220 705 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC006363.1-201ENST00000603806 463 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 MRPL50P2-201ENST00000416821 482 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TRGV5P-201ENST00000419915 354 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TOMM20P4-201ENST00000427861 435 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 MOB1AP1-201ENST00000430903 535 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 UBE2V2P4-201ENST00000447495 259 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AP006245.1-201ENST00000522549 120 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC026333.2-201ENST00000542164 106 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AL133247.2-201ENST00000603236 482 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 ATP1B3P1-201ENST00000605365 821 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 CYCSP41-201ENST00000616920 296 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 DDX18P4-201ENST00000511690 1966 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC110794.1-201ENST00000505816 425 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC026801.2-201ENST00000515352 425 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC025754.2-201ENST00000606491 432 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC004832.5-201ENST00000608677 401 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AL672296.1-201ENST00000427780 2158 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TCP1P3-201ENST00000414406 1498 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC083843.3-201ENST00000623679 2186 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 DCAF13P3-201ENST00000561147 1334 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 RPS4XP6-201ENST00000477670 797 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC109458.1-201ENST00000508858 316 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 OR4C2P-201ENST00000530855 1064 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC234778.2-201ENST00000566241 354 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AC008638.3-201ENST00000603341 463 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 OR5AC4P-202ENST00000642086 985 ntBASIC2.8□□□□□ -1.96
CSMD1Q96PZ7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 RSL24D1P1-201ENST00000404972 493 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 RN7SL20P-201ENST00000488827 297 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 FCF1P3-201ENST00000496394 590 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 EEF1A1P37-201ENST00000522748 715 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC008489.1-201ENST00000524271 483 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC004024.1-201ENST00000549244 247 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC093524.1-201ENST00000564266 1094 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC243829.7-201ENST00000633081 225 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 RPL35AP12-201ENST00000425362 338 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 BRDTP1-201ENST00000605735 677 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 BNIP3P41-202ENST00000616656 861 ntBASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD1Q96PZ7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms