Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL512646.1-201ENST00000269395 1077 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RNA5SP514-201ENST00000363717 111 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RNU6-777P-201ENST00000364265 104 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RNU6-282P-201ENST00000365357 103 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 MIR130A-201ENST00000385274 89 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RNU1-149P-201ENST00000390870 161 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RAB28P1-201ENST00000411517 641 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC127391.1-201ENST00000411737 98 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RPL12P9-201ENST00000412942 488 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 MTATP6P18-201ENST00000417994 673 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 MTND6P18-201ENST00000439477 513 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 OR7E116P-201ENST00000448529 957 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 HIGD1AP8-201ENST00000453927 274 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC011225.1-201ENST00000457751 369 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RPS15AP36-201ENST00000492022 382 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC105384.2-201ENST00000508433 640 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC008562.1-201ENST00000521763 330 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC007151.1-201ENST00000572774 483 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC011468.4-201ENST00000603942 409 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL133173.2-201ENST00000614270 90 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AL603758.1-201ENST00000618654 241 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RMST_7.1-201ENST00000621935 268 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
CCDC85AQ96PX6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 Y_RNA.138-201ENST00000363462 102 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 RNA5SP30-201ENST00000365552 115 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 RNU6-738P-201ENST00000384531 106 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AL122016.1-201ENST00000403365 367 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 HMGB1P17-201ENST00000403495 628 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 MTCO2P5-201ENST00000422621 426 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 MTCO3P46-201ENST00000425787 232 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC104837.2-201ENST00000427236 424 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 OR2B7P-201ENST00000429302 934 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC236972.2-201ENST00000434979 310 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC006335.2-201ENST00000437993 330 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 SPRYD7P1-201ENST00000443861 570 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AL450023.1-201ENST00000450868 751 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 SLC25A51P1-201ENST00000468432 871 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC026427.2-201ENST00000506228 536 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 TOMM22P4-201ENST00000511318 336 ntBASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.07□□□□□ -1.28
CCDC85AQ96PX6 BX510359.5-201ENST00000515651 304 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms