Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 MTCO3P22-201ENST00000603219 784 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC010857.1-201ENST00000606398 594 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.61□□□□□ -1.83
COL21A1Q96P44 AC116563.2-201ENST00000624751 535 ntBASIC3.61□□□□□ -1.83
COL21A1Q96P44 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL21A1Q96P44 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 ASNSP1-204ENST00000641977 1664 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 SNORA62.2-201ENST00000364672 152 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 SNORA27.3-201ENST00000364937 134 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 RNU6-317P-201ENST00000384031 107 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 RNU6-244P-201ENST00000391028 104 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC034236.1-201ENST00000469891 373 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC006511.1-201ENST00000470614 315 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 NDUFA5P2-201ENST00000519723 344 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 VN1R85P-201ENST00000601587 426 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC110792.4-201ENST00000609843 298 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC055764.2-201ENST00000610089 670 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 AL391261.4-201ENST00000616012 481 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 AC091905.1-201ENST00000624400 311 ntBASIC3.6□□□□□ -1.83
COL21A1Q96P44 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL21A1Q96P44 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL21A1Q96P44 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 MAPK10-372ENST00000641954 3413 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 RNA5SP515-201ENST00000364570 118 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 SNORA57.1-201ENST00000391227 145 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 RPL17P50-201ENST00000396131 546 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 RNU4-74P-201ENST00000411280 161 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 MTND4P11-201ENST00000417020 1058 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC127526.1-201ENST00000417526 366 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AL138785.1-201ENST00000425821 331 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC022034.3-201ENST00000471393 478 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 RN7SL132P-201ENST00000478131 296 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 VN1R105P-201ENST00000486595 910 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL21A1Q96P44 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 NF1P5-201ENST00000588287 448 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC015726.1-201ENST00000602353 681 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AL390816.3-201ENST00000604527 1066 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC115621.1-201ENST00000604653 858 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC242628.1-201ENST00000606810 391 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC024941.1-201ENST00000612250 334 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AC024023.1-201ENST00000624530 922 ntBASIC3.59□□□□□ -1.83
COL21A1Q96P44 AP003072.4-201ENST00000624580 310 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms