Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC074029.4-201ENST00000624796 1859 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC016716.1-201ENST00000265882 708 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 RPL7P57-201ENST00000423238 740 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL050321.1-201ENST00000432363 400 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 CEACAMP1-201ENST00000434624 1035 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 H2AFZP5-201ENST00000446960 382 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 RPL23AP15-201ENST00000450202 459 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL591473.1-201ENST00000464297 313 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC010307.1-201ENST00000467206 836 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 BZW1P2-201ENST00000473537 826 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SL826P-201ENST00000479724 288 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 SETP14-201ENST00000497538 873 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 SCARNA22-201ENST00000503991 125 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 RPL7L1P13-201ENST00000511702 739 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP31-201ENST00000516354 278 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 UBE2NP1-201ENST00000545592 458 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC135628.1-201ENST00000568867 534 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC090616.2-202ENST00000584248 222 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL391358.1-201ENST00000605342 190 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 AL049555.1-201ENST00000562834 1933 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 DBF4P1-201ENST00000412976 1892 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 OR51H2P-202ENST00000641424 3046 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-492P-201ENST00000363035 104 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 Y_RNA.311-201ENST00000365068 96 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP267-201ENST00000410381 285 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP100-201ENST00000411258 284 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RSU1P3-201ENST00000412878 835 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 BX510359.2-201ENST00000417920 305 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 BOLA3P4-201ENST00000418151 400 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RPL30P3-201ENST00000424262 333 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 IPMKP1-201ENST00000425988 855 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL390023.1-201ENST00000428836 262 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC008072.1-201ENST00000434254 824 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC016831.4-201ENST00000438302 307 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL591503.2-201ENST00000442314 1005 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 MTCYBP3-201ENST00000445588 1137 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC104651.2-201ENST00000447549 528 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RSL24D1P3-201ENST00000449255 495 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC112206.1-201ENST00000468416 477 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC104689.1-201ENST00000473356 768 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC083982.1-201ENST00000485679 344 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RNU2-30P-201ENST00000516209 141 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-759P-201ENST00000516740 103 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC103881.1-201ENST00000603476 538 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL163642.2-201ENST00000604722 1019 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL592221.1-201ENST00000605266 382 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC010857.1-201ENST00000606398 594 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC245008.1-201ENST00000608123 476 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AL354976.1-201ENST00000613843 387 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms