Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 OR4A15-201ENST00000314706 1035 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL079342.2-201ENST00000403367 482 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 FCF1P2-201ENST00000415284 583 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 MTCYBP24-201ENST00000420387 1106 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 FAR2P4-202ENST00000425399 584 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 Z93242.1-201ENST00000427102 353 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 HSFY7P-201ENST00000432672 318 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL049745.1-201ENST00000433953 286 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 HSFY8P-201ENST00000437934 318 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 HSFY5P-201ENST00000453726 309 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC010307.1-201ENST00000467206 836 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AP000926.1-201ENST00000479573 241 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC146944.2-203ENST00000502493 354 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 BOLA3P3-201ENST00000505182 232 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC139495.1-202ENST00000513164 354 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 OR4R3P-201ENST00000525084 838 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 OR5M7P-201ENST00000526140 972 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AP000790.1-201ENST00000528891 737 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LRRC6P1-201ENST00000532188 885 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC092747.2-201ENST00000545069 983 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LSM6P2-201ENST00000552208 177 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL133338.2-201ENST00000604292 736 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC112220.2-201ENST00000605513 533 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC024060.1-201ENST00000607052 494 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL031666.3-201ENST00000609320 1006 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC121761.2-201ENST00000617300 689 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC022306.3-201ENST00000619930 550 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AL359893.1-201ENST00000447628 1580 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 AC097504.1-201ENST00000515103 2415 ntBASIC4.22□□□□□ -1.73
VPS33AQ96AX1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.21□□□□□ -1.73
VPS33AQ96AX1 AL645568.2-201ENST00000432815 1337 ntBASIC4.21□□□□□ -1.73
VPS33AQ96AX1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS33AQ96AX1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 RNU6-251P-201ENST00000363235 104 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 Y_RNA.578-201ENST00000390903 88 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 LYPLA1P1-201ENST00000434514 622 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC241584.1-201ENST00000438469 1241 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 RPL36AP15-201ENST00000444514 266 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 MTATP6P14-201ENST00000455189 673 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 VPS26AP1-201ENST00000483197 979 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms