Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFT1Q96AA3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 MIR122-201ENST00000385044 85 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC092642.1-201ENST00000392417 425 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 SPTLC1P2-201ENST00000407089 121 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 SNORA74C-2-201ENST00000411179 201 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 RN7SKP100-201ENST00000411258 284 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 RPS3AP9-201ENST00000417027 792 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 BX510359.2-201ENST00000417920 305 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 RPL23AP93-201ENST00000440847 484 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 Z99714.1-201ENST00000450463 807 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 USP9YP5-201ENST00000511770 630 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC016065.2-201ENST00000514530 444 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 RNA5SP135-201ENST00000517019 125 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC107016.1-201ENST00000550463 337 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 RPL23AP97-201ENST00000568955 471 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC024060.1-201ENST00000607052 494 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFT1Q96AA3 AC104763.3-201ENST00000613765 618 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 AL359715.5-201ENST00000623431 443 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 ZNF137P-201ENST00000456718 1920 ntBASIC3.87□□□□□ -1.79
RFT1Q96AA3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFT1Q96AA3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
RFT1Q96AA3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFT1Q96AA3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 CR788268.1-201ENST00000603931 1809 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC021146.4-201ENST00000309229 279 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 MIR124-3-201ENST00000384866 87 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 MTCO3P31-201ENST00000405526 789 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 BTF3P8-201ENST00000414577 526 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC008072.1-201ENST00000434254 824 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 PTMAP6-201ENST00000439110 327 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 Z77249.1-201ENST00000444622 1175 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 HMGB1P16-201ENST00000447155 540 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 RPL7P59-201ENST00000447700 943 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 ANP32BP2-201ENST00000454525 545 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 RPS27AP17-201ENST00000463344 455 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 RN7SL585P-201ENST00000470538 280 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 RPL21P103-201ENST00000479921 488 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 RPS4XP14-201ENST00000493072 781 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 MTND4LP2-201ENST00000502312 285 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 OR7H2P-201ENST00000513483 306 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 RN7SKP277-201ENST00000516895 283 ntBASIC3.86□□□□□ -1.79
RFT1Q96AA3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.86□□□□□ -1.79
RFT1Q96AA3 MTCO3P15-201ENST00000526563 574 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms